LOCUS BC009455 1951 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 49, mRNA (cDNA clone
MGC:15922 IMAGE:3535652), complete cds.
ACCESSION BC009455
VERSION BC009455.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1951)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: j Column: 22.
FEATURES Location/Qualifiers
source 1..1951
/db_xref="H-InvDB:HIT000034374"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15922 IMAGE:3535652"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1951
/gene="C11orf49"
/gene_synonym="FLJ22210"
/gene_synonym="MGC4707"
/db_xref="GeneID:79096"
/db_xref="HGNC:HGNC:28720"
CDS 39..863
/gene="C11orf49"
/gene_synonym="FLJ22210"
/gene_synonym="MGC4707"
/codon_start=1
/product="chromosome 11 open reading frame 49"
/protein_id="AAH09455.1"
/db_xref="GeneID:79096"
/db_xref="HGNC:HGNC:28720"
/translation="MLSPERLALPDYEYLAQRHVLTYMEDAVCQLLENREDISQYGIA
RFFTEYFNSVCQGTHILFREFSFVQATPHNRVSFLRAFWRCFRTVGKNGDLLTMKEYH
CLLQLLCPDFPLELTQKAARIVLMDDAMDCLMSFSDFLFAFQIQFYYSEFLDSVAAIY
EDLLSGKNPNTVIVPTSSSGQHRQRPALGGAGTLEGVEASLFYQCLENLCDRHKYSCP
PPALVKEALSNVQRLTFYGFLMALSKHRGINQALGALPDKGDLMHDPAMDEELERL"
BASE COUNT 460 a 561 c 508 g 422 t
ORIGIN
1 ccggagagct ggagctttga agccaccccg gtcaaaggat gctgagtccg gagcgcctag
61 ccctaccgga ctacgagtat ctggctcagc gacatgtcct cacctacatg gaggatgcag
121 tgtgccagct gctagaaaac agggaagata ttagccaata tggaattgcc aggttcttca
181 ctgaatattt taacagtgta tgccagggaa cacacattct ctttcgagaa ttcagcttcg
241 tccaagccac cccccacaat agggtatcat ttttacgggc cttctggaga tgcttccgaa
301 ctgtgggcaa aaatggcgat ttgctgacca tgaaagaata tcactgtttg ctgcaattac
361 tgtgtcctga tttcccgctg gagctcactc agaaagcagc caggattgtg ctcatggacg
421 atgccatgga ctgcttgatg tctttttcag atttcctctt tgccttccag atccagtttt
481 actactcaga attcctggac agtgtggctg ccatctatga ggacctgctg tcaggcaaga
541 accccaacac agtgattgtg ccgacgtcgt ccagtgggca gcaccgccaa cgacctgcct
601 tgggcggggc cggcacgctg gagggcgtgg aggcgtcgct gttctaccag tgtctggaaa
661 acctgtgtga tcggcacaag tacagctgcc cacccccagc acttgtcaaa gaggccctca
721 gcaatgttca gagactgacc ttctatggat tcctcatggc tctctcaaag caccgtggaa
781 tcaaccaagc cctcggagct ttgcctgaca agggggatct gatgcacgac ccagcaatgg
841 atgaagagct ggaacggctg taagtgtcaa gtgggaggat actgccccct tgtgggggcc
901 agacgggtcg gacacggctg tgccccatct ggggccaaca ccacttgtct gtaacatccc
961 acatctgcca gggaagggtc tgggggccag tggaggcctg aggtgtccct ccctctgagt
1021 cctttggggg ctgcagccca gggatttacc ctagtgttaa gagtgggcat ggaggccctg
1081 ctctctgtac aggaggcctc tcgctgccct ccaggcttct tcccttcttc aggctggccc
1141 aggtcccagg cctggtcaac tcggtcacag ccagtccaga ggccagttgc ctgccttccc
1201 ggacccctcc ccgggttggc tctccctgga gacctctcca tcattcccga aaagtggatg
1261 gagagagtga tggctccact gaagagacag acgagtcgga gacttgagga gtccaaaggg
1321 tcctgcccac agcgccctgt acctgctccc acccagccct tggtgtgccc acccagcctc
1381 ctctccagca ccttgctgtg ctgccctctg ctgctgacaa ggtgaataac agccccaaga
1441 ccagccagag gggctctgat gatcagccca gccagtggcc ccggaaggtg aatggcctgc
1501 tctccctggc cctatcagcc tgtgaacttc acttaggccc caagctgaca gactgtgctg
1561 aggccacctt gtcacgccgt agcctgttag tcctcctaac ctcttaagag cagtctcttc
1621 tgagccagcc tctgcgggtc ccccaataag gttcatctcc tcacagcaac tccattaagg
1681 gggagaaccc gaatagccac gcagggcctt gcaccatcaa gggtgacacc tgcgacgcaa
1741 gtaccaggag gacataaccg ctgtggcctg ttggagaaca gccagtagcc ttggtaatat
1801 gaagggtggg ccagaagatg atttcacttg caaaaactgc ttcaagtctt gacccctttg
1861 tgtctaatag ctaaacaaac atgtgaaacg aataaaaagt ccctcatgtc tggtaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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