LOCUS BC009418 1644 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chondrolectin, mRNA (cDNA clone MGC:15027 IMAGE:3509743), complete cds. ACCESSION BC009418 VERSION BC009418.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1644) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1644) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 23 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20127635. FEATURES Location/Qualifiers source 1..1644 /db_xref="H-InvDB:HIT000034351" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15027 IMAGE:3509743" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1644 /gene="CHODL" /gene_synonym="FLJ12627" /gene_synonym="MT75" /gene_synonym="PRED12" /db_xref="GeneID:140578" /db_xref="HGNC:HGNC:17807" /db_xref="MIM:607247" CDS 362..1183 /gene="CHODL" /gene_synonym="FLJ12627" /gene_synonym="MT75" /gene_synonym="PRED12" /codon_start=1 /product="chondrolectin" /protein_id="AAH09418.1" /db_xref="GeneID:140578" /db_xref="HGNC:HGNC:17807" /db_xref="MIM:607247" /translation="MSRVVSLLLGAALLCGHGAFCRRVVSGQKVCFADFKHPCYKMAY FHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIG LWRNGDGQTSGACPDLYQWSDGSNSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGP YLYQWNDDRCNMKHNYICKYEPEINPTAPVEKPYLTNQPGDTHQNVVVTEAGIIPNLI YVVIPTIPLLLLILVAFGTCCFQMLHKSKGRTKTSPNQSTLWISKSTRKESGMEV" BASE COUNT 460 a 377 c 414 g 393 t ORIGIN 1 ccggctcagc ctctcacttg tcagaggccg gggaagagaa gcaaagcgca acggtgtggt 61 ccaagccggg gcttctgctt cgcctctagg acatacacgg gaccccctaa cttcagtccc 121 ccaaacgcgc accctcgaag tcttgaactc cagccccgca catccacgcg cggcacaggc 181 gcggcaggcg gcaggtcccg gccgaaggcg atgcgcgcag ggggtcgggc agctgggctc 241 gggcggcggg agtagggccc ggcagggagg cagggaggct gcagagtcag agtcgcgggc 301 tgcgccctgg gcagaggccg ccctcgctcc acgcaacacc tgctgctgcc accgcgccgc 361 gatgagccgc gtggtctcgc tgctgctggg cgccgcgctg ctctgcggcc acggagcctt 421 ctgccgccgc gtggtcagcg gccaaaaggt gtgttttgct gacttcaagc atccctgcta 481 caaaatggcc tacttccatg aactgtccag ccgagtgagc tttcaggagg cacgcctggc 541 ttgtgagagt gagggaggag tcctcctcag ccttgagaat gaagcagaac agaagttaat 601 agagagcatg ttgcaaaacc tgacaaaacc cgggacaggg atttctgatg gtgatttctg 661 gatagggctt tggaggaatg gagatgggca aacatctggt gcctgcccag atctctacca 721 gtggtctgat ggaagcaatt cccagtaccg aaactggtac acagatgaac cttcctgcgg 781 aagtgaaaag tgtgttgtga tgtatcacca accaactgcc aatcctggcc ttgggggtcc 841 ctacctttac cagtggaatg atgacaggtg taacatgaag cacaattata tttgcaagta 901 tgaaccagag attaatccaa cagcccctgt agaaaagcct tatcttacaa atcaaccagg 961 agacacccat cagaatgtgg ttgttactga agcaggtata attcccaatc taatttatgt 1021 tgttatacca acaatacccc tgctcttact gatactggtt gcttttggaa cctgttgttt 1081 ccagatgctg cataaaagta aaggaagaac aaaaactagt ccaaaccagt ctacactgtg 1141 gatttcaaag agtaccagaa aagaaagtgg catggaagta taataactca ttgacttggt 1201 tccagaattt tgtaattctg gatctgtata aggaatggca tcagaacaat agcttggaat 1261 ggcttgaaat cacaaaggat ctgcaagatg aactgtaagc tcccccttga ggcaaatatt 1321 aaagtaattt ttatatgtct attatttcat ttaaagaata tgctgtgcta ataatggagt 1381 gagacatgct tattttgcta aaggatgcac ccaaacttca aacttcaagc aaatgaaatg 1441 gacaatgcag ataaagttgt tatcaacacg tcgggagtat gtgtgttaga agcaattcct 1501 tttatttctt tcacctttca taagttgtta tctagtcaat gtaatgtata ttgtattgaa 1561 atttacagtg tgcaaaagta ttttaccttt gcataagtgt ttgataaaaa tgaactgttc 1621 taataaaaaa aaaaaaaaaa aaaa //