LOCUS BC009412 1503 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens paired-like homeodomain 1, mRNA (cDNA clone MGC:10891 IMAGE:3622592), complete cds. ACCESSION BC009412 VERSION BC009412.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1503) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1503) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: l Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24234701. FEATURES Location/Qualifiers source 1..1503 /db_xref="H-InvDB:HIT000034348" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10891 IMAGE:3622592" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1503 /gene="PITX1" /gene_synonym="POTX" /gene_synonym="PTX1" /db_xref="GeneID:5307" /db_xref="HGNC:HGNC:9004" /db_xref="MIM:602149" CDS 329..1273 /gene="PITX1" /gene_synonym="POTX" /gene_synonym="PTX1" /codon_start=1 /product="paired-like homeodomain 1" /protein_id="AAH09412.1" /db_xref="GeneID:5307" /db_xref="HGNC:HGNC:9004" /db_xref="MIM:602149" /translation="MDAFKGGMSLERLPEGLRPPPPPPHDMGPAFHLARPADPREPLE NSASESSDTELPEKERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQ ELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGGY VPQFSGLVQPYEDVYAAGYSYNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFSAPS SISSMTMPSSMGPGAVPGMPNSGLNNINNLTGSSLNSAMSPGACPYGTPASPYSVYRD TCNSSLASLRLKSKQHSSFGYGGLQGPASGLNACQYNS" BASE COUNT 271 a 566 c 486 g 180 t ORIGIN 1 ccgtccggag ccttagaaac cggccccgga tcgcgagccg gagccggagc cggagccggg 61 gccggccggg ctgctgaggc ccgagcggca ggagcgcagc gcggagcgct gagccaggcg 121 cccagtcgcg agaagctgcc gccgcctctg cccgcccggc gccgcagccc cgggcggtcc 181 atggggcggg cacggcgtcg ctgcaggcgc cggcagccct ggagggcagc cgcttaggcg 241 ctgcgctctt gtccccgcag gtcgcagcca gggcggcggg gcgcgcccag ccccggcccc 301 tggagcgccc gccgcggtcc ccacctccat ggacgccttc aaggggggca tgagcctgga 361 gcggctgccg gaggggctcc ggccgccgcc gccgccaccc catgacatgg ggcccgcctt 421 ccacctggcc cggcccgccg acccccgcga gccgctcgag aactccgcca gcgagtcgtc 481 tgacacggag ctgccagaga aggagcgcgg cggggaaccc aaggggcccg aggacagtgg 541 tgcgggaggc acgggctgcg gcggcgcaga cgacccagcc aagaagaaga agcagcggcg 601 gcaacgtacg cacttcacaa gccagcagtt gcaagagcta gaggccacgt tccagaggaa 661 ccgctacccc gacatgagca tgagggagga gatcgccgtg tggaccaacc tcaccgagcc 721 gcgcgtgcgg gtctggttca agaaccggcg agccaagtgg cgtaagcgcg agcgtaacca 781 gcagctggac ctgtgcaagg gtggctacgt gccgcagttc agcggcctag tgcagcccta 841 cgaggacgtg tacgccgccg gctactccta caacaactgg gccgccaaga gcctggcgcc 901 agcgccgctc tccaccaaga gcttcacctt cttcaactcc atgagcccgc tgtcgtcgca 961 gtccatgttc tcagcaccca gctccatctc ctccatgacc atgccgtcca gcatgggccc 1021 aggcgccgtg cctggcatgc ccaactcggg cctcaacaac atcaacaacc tcaccggctc 1081 ctcgctcaac tcggccatgt cgccgggcgc ttgcccgtac ggcactcccg cctcgcccta 1141 cagcgtctac cgggacacgt gcaactcgag cctagccagc ctgcggctca agtccaaaca 1201 gcactcgtcg tttggctacg gcggcctgca gggcccggcc tcgggcctca acgcgtgcca 1261 gtacaacagc tgaccgcccc gccgcaccac gcgggccggc ggccggagcg gggaagggcg 1321 cgggcgcggg cgcggaggac gcacgcgggg ccccggctcg caagccccag ctcaccgcgc 1381 cgcggacctc acacctgcgc agccccctcc tcccacttcc cactccgggt tggttttgtg 1441 tttgcttttc cggaccccac tctgccctcc aaaaagccaa aaaaaaaaaa aaaaaaaaaa 1501 aaa //