LOCUS BC009386 4390 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier family 4, anion exchanger, member 2
(erythrocyte membrane protein band 3-like 1), mRNA (cDNA clone
MGC:16704 IMAGE:4127724), complete cds.
ACCESSION BC009386
VERSION BC009386.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4390)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4390)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC009386.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..4390
/db_xref="H-InvDB:HIT000034325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16704 IMAGE:4127724"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4390
/gene="SLC4A2"
/gene_synonym="BND3L"
/gene_synonym="HKB3"
/gene_synonym="NBND3"
/db_xref="GeneID:6522"
/db_xref="MIM:109280"
CDS 530..4213
/gene="SLC4A2"
/gene_synonym="BND3L"
/gene_synonym="HKB3"
/gene_synonym="NBND3"
/codon_start=1
/product="SLC4A2 protein"
/protein_id="AAH09386.1"
/db_xref="GeneID:6522"
/db_xref="MIM:109280"
/translation="MTQPEPESLGPGTPGFPEQEEDELHRTLGVERFEEILQEAGSRG
GEEPGRSYGEEDFEYHRQSSHHIHHPLSTHLPPDARRRKTPQGPGRKPRRRPGASPTG
ETPTIEEGEEDEDEASEAEGARALTQPSPVSTPSSVQFFLQEDDSADRKAERTSPSSP
APLPHQEATPRASKGAQAGTQVEEAEAEAVAVASGTAGGDDGGASGRPLPKAQPGHRS
YNLQERRRIGSMTGAEQALLPRVPTDEIEAQTLATADLDLMKSHRFEDVPGVRRHLVR
KNAKGSTQSGREGREPGPTPRARPRAPHKPHEVFVELNELLLDKNQEPQWRETARWIK
FEEDVEEETERWGKPHVASLSFRSLLELRRTLAHGAVLLDLDQQTLPGVAHQVVEQMV
ISDQIKAEDRANVLRALLLKHSHPSDEKDFSFPRNISAGSLGSLLGHHHGQGAESDPH
VTEPLMGGVPETRLEVERERELPPPAPPAGITRSKSKHELKLLEKIPENAEATVVLVG
CVEFLSRPTMAFVRLREAVELDAVLEVPVPVRFLFLLLGPSSANMDYHEIGRSISTLM
SDKQFHEAAYLADEREDLLTAINAFLDCSVVLPPSEVQGEELLRSVAHFQRQMLKKRE
EQGRLLPTGAGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGGLIRDVRRRYPHY
LSDFRDALDPQCLAAVIFIYFAALSPAITFGGLLGEKTQDLIGVSELIMSTALQGVVF
CLLGAQPLLVIGFSGPLLVFEEAFFSFCSSNHLEYLVGRVWIGFWLVFLALLMVALEG
SFLVRFVSRFTQEIFAFLISLIFIYETFYKLVKIFQEHPLHGCSASNSSEVDGGENMT
WAGARPTLGPGNRSLAGQSGQGKPRGQPNTALLSLVLMAGTFFIAFFLRKFKNSRFFP
GRIRRVIGDFGVPIAILIMVLVDYSIEDTYTQKLSVPSGFSVTAPEKRGWVINPLGEK
SPFPVWMMVASLLPAILVFILIFMETQITTLIISKKERMLQKGSGFHLDLLLIVAMGG
ICALFGLPWLAAATVRSVTHANALTVMSKAVAPGDKPKIQEVKEQRVTGLLVALLVGL
SIVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDVTYVKKVRT
LRMHLFTALQLLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTDREMKCLDA
NEAEPVFDEREGVDEYNEMPMPV"
BASE COUNT 780 a 1402 c 1370 g 838 t
ORIGIN
1 ctgcggcctc aggtgcgagg ggtctgcgac cctctctccc catggcggca agctccctgc
61 gcctctcccc gtcccctcgt cccacggggc tgcttctggt gggagtgggg ctgggcgctt
121 aggggagcca ggagatggac aggagccttc ctcacagagg ggagaagcca gccccctggc
181 ccgctcacct tctcttatcc ggtgttctgc cagtcccagc tgctccagtc cccacctcgc
241 ccctaagacc cgcccttcac cccagccctc cccgcgctct tccttgttct ggctgctggc
301 accgctatgg agggggctgc atacccccgc ccttggagat cccgatgccc ttcaggtcca
361 gaagctcttg agcaaatatt tggcggcgcc tggagctgag accgtgggtg ggtggggggc
421 tggaccaagg ctgcctggcc aggcggctgc cgcttagctg ggctgagctc ttacaagcgc
481 cgcattccct gccggctgtg ccggccggcc gctgctccgc gcccgcagga tgactcagcc
541 agagccagag agcttgggcc ctgggacgcc tgggttcccc gagcaggagg aagacgaact
601 tcaccgcacc ctgggcgtgg agcggtttga ggagatccta caggaggccg ggtctcgtgg
661 aggggaggag ccaggccgca gctatgggga ggaagacttt gagtaccacc gccagtcctc
721 ccaccacatc catcacccac tgtccaccca cctgcctccg gatgcacgcc gacgcaagac
781 accccagggc ccaggacgga agcctcgaag gcgcccggga gcctccccga ctggagaaac
841 cccgaccatt gaggaggggg aggaagatga ggatgaggcc agcgaggctg agggggcccg
901 ggctctcact cagccgtccc ctgtctccac accctcctcg gtgcagttct ttctccaaga
961 ggatgacagt gctgaccgga aggcagagag gaccagtcca tcttcccctg caccactgcc
1021 ccaccaggag gcgactcctc gggcctccaa aggggcccag gctggaaccc aggtggagga
1081 ggcggaggcg gaggcggtgg cggtggccag tggcactgca gggggtgacg acgggggtgc
1141 ctcggggcgc cccctgccca aagcccagcc tgggcaccgc agctacaacc ttcaggagag
1201 gaggcgcatc gggagcatga ctggggctga gcaggcactg ctgccccggg tccccacgga
1261 tgagattgag gcccagacgc tggccacggc cgacctagac ctcatgaaga gtcaccggtt
1321 tgaggacgtt cctggggtgc ggcggcactt ggtgcggaag aatgccaaag gttccacaca
1381 gagtggccga gaagggcggg agcctggccc cacacctcgg gcccgacccc gggcccccca
1441 caagccccat gaggtgtttg tggagctgaa tgagttgctc ctggacaaaa accaggagcc
1501 ccagtggcgg gagacagctc gctggatcaa atttgaagag gacgtggagg aggagaccga
1561 gcgctggggg aagccccacg tggcctccct ctccttccgc agtctcctgg agctccgcag
1621 gaccctggcc catggggctg tgctcttgga tctggaccag cagaccctgc ccggagtggc
1681 ccaccaggtg gtggagcaga tggtcatctc tgaccagatc aaggccgagg acagggccaa
1741 cgtgctgcgg gctctgctgt tgaaacacag ccacccaagt gatgagaagg acttctcctt
1801 cccccgcaac atctcagctg gctccctggg ctccctgctg gggcatcacc atggtcaggg
1861 ggctgagagt gacccccacg tcaccgagcc tctcatggga ggtgttcctg agacccggct
1921 ggaggtggag cgagagcgtg agctgccgcc tccagcacca ccagctggca tcacccgctc
1981 caagtccaag cacgagctga aactgctgga gaagattcct gagaatgccg aggccacggt
2041 ggtccttgtg ggctgcgtgg agttcctctc ccgccccacc atggcctttg tgcggctccg
2101 ggaggctgtg gagttggacg cagtgttgga ggtgccggtg cctgtgcgtt tcctcttcct
2161 gctgctgggc ccgagtagtg ccaacatgga ctaccacgag atcggccgct ccatctccac
2221 cctcatgtca gacaagcaat tccacgaggc agcctacctg gctgacgagc gggaggacct
2281 gctgacggcc atcaacgcct tcctggactg cagcgtggtg ctgccgcctt cagaagtgca
2341 gggcgaggag ctgctgcgct ctgtggccca cttccagcgc cagatgctca agaagcgaga
2401 ggagcagggc cggctgctac ctacaggggc tgggctggag cccaaatctg cccaagataa
2461 ggcgctcctg cagatggtag aggcggcagg ggcagctgaa gatgatcccc ttcggcggac
2521 ggggcggccc tttggggggc tgatccgaga tgtgcggcgc cgctatcccc actacctgag
2581 tgacttccga gatgcacttg accctcagtg cctggccgca gtcatcttca tctactttgc
2641 cgccctgtct cctgccatca cctttggggg gctgctggga gagaagacac aggacctgat
2701 aggggtgtcg gagctgatta tgtccacagc gctccagggc gtggtcttct gcctgctggg
2761 tgcccagccc ctgttggtga tcggcttctc agggcccctg ctggtctttg aggaggcctt
2821 cttctcgttc tgtagcagca accacctgga gtacctggtg ggccgtgtgt ggatcggctt
2881 ctggctggtg ttcctggccc tgctcatggt ggccctggag gggagcttcc tggtccgctt
2941 cgtctcccgc ttcacccagg agatcttcgc cttcttgatc tcactcatct tcatctatga
3001 gaccttctac aagctggtga agatcttcca ggagcacccc ctgcatggct gctcagcctc
3061 caacagctca gaggtggacg gcggtgagaa catgacatgg gccggggcaa gacccacgct
3121 ggggccgggc aacaggagct tggctgggca gtctgggcag gggaagcccc ggggccagcc
3181 caacacggcc ctgctgtcgc tggtgctcat ggccggcacc ttcttcatcg ccttcttcct
3241 gcgcaaattc aagaacagcc ggttctttcc tggccggatc cggcgggtga ttggggactt
3301 tggggtgccc atcgccatcc tcatcatggt gcttgtggat tacagtattg aggacaccta
3361 tacccagaag ctgagcgttc ccagtggatt ctcggtgact gccccagaaa agaggggctg
3421 ggtcatcaac cccctgggag agaagagccc cttccctgtg tggatgatgg ttgccagcct
3481 gctgcccgcc atcctggtct tcattctcat cttcatggag acacagatca ccacgctcat
3541 catctccaag aaggagcgca tgctgcagaa gggctccggc ttccacctgg acctgctgct
3601 catcgtggcc atgggcggca tctgtgccct ctttggcctg ccctggttgg ctgctgccac
3661 tgtccgctct gtcactcacg ccaacgcgct cactgtcatg agcaaggctg tggcacctgg
3721 ggacaagccc aagattcagg aagtcaagga gcagcgggtg acggggctgc tggttgccct
3781 gcttgtgggc ctctccatag ttatcgggga tctgctccgg cagatccccc tggccgtgct
3841 ctttggaatt ttcctgtaca tgggagtcac ctcccttaac gggatccagt tctatgagcg
3901 gctgcatctg ctgctcatgc cgcccaaaca ccacccagat gtcacttacg tcaagaaggt
3961 ccggaccctc cgtatgcacc tgttcacggc cctgcagctg ctctgcctgg ccctgctctg
4021 ggccgtcatg tccacagctg cctccctggc cttccccttc atcctcatcc tcacagtgcc
4081 gctccgcatg gtggtgctca cccgtatctt caccgaccga gagatgaaat gtctggatgc
4141 taacgaggca gagccggtgt ttgatgagcg ggagggtgtg gacgagtaca atgagatgcc
4201 catgcctgtg tagccgccac cgagggacag ccgagggacc gatggacgag gggacaggct
4261 ggtgggatgg ggttccccct cccatgcccc tccctccttt ttatttaagt gaataattta
4321 aagtcttctc ctcccccact gcccctgcag taaagtgctt tggcccccaa aaaaaaaaaa
4381 aaaaaaaaaa
//