LOCUS BC009317 2323 bp mRNA linear HUM 25-OCT-2007
DEFINITION Homo sapiens acyl-CoA synthetase short-chain family member 3, mRNA
(cDNA clone MGC:14920 IMAGE:4120563), complete cds.
ACCESSION BC009317
VERSION BC009317.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2323)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2323)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009317.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: c Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38505216.
FEATURES Location/Qualifiers
source 1..2323
/db_xref="H-InvDB:HIT000034277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14920 IMAGE:4120563"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2323
/gene="ACSS3"
/db_xref="GeneID:79611"
/db_xref="HGNC:HGNC:24723"
CDS 92..2152
/gene="ACSS3"
/codon_start=1
/product="acyl-CoA synthetase short-chain family member 3"
/protein_id="AAH09317.1"
/db_xref="GeneID:79611"
/db_xref="HGNC:HGNC:24723"
/translation="MKPSWLQCRKVTSAGGLGGPLPGSSPARGAGAALRALVVPGPRG
GLGGRGCRALSSGSGSEYKTHFAASVTDPERFWGKAAEQISWYKPWTKTLENKHSPST
RWFVEGMLNICYNAVDRHIENGKGDKIAIIYDSPVTNTKATFTYKEVLEQVSKLAGVL
VKHGIKKGDTVVIYMPMIPQAMYTMLACARIGAIHSLIFGGFASKELSSRIDHVKPKV
VVTASFGIEPGRRVEYVPLVEEALKIGQHKPDKILIYNRPNMEAVPLAPGRDLDWDEE
MAKAQSHDCVPVLSEHPLYILYTSGTTGLPKGVIRPTGGYAVMLHWSMSSIYGLQPGE
VWWAASDLGWVVGHSYICYGPLLHGNTTVLYEGKPVGTPDAGAYFRVLAEHGVAALFT
APTAIRAIRQQDPGAALGKQYSLTRFKTLFVAGERCDVETLEWSKNVFRVPVLDHWWQ
TETGSPITASCVGLGNSKTPPPGQAGKSVPGYNVMILDDNMQKLKARCLGNIVVKLPL
PPGAFSGLWKNQEAFKHLYFEKFPGYYDTMDAGYMDEEGYLYVMSRVDDVINVAGHRI
SAGAIEESILSHGTVADCAVVGKEDPLKGHVPLALCVLRKDINATEEQVLEEIVKHVR
QNIGPVAAFRNAVFVKQLPKTRSGKIPRSALSAIVNGKPYKITSTIEDPSIFGHVEEM
LKQA"
BASE COUNT 642 a 502 c 585 g 594 t
ORIGIN
1 gcccccgccc cctactccct tccctcaggc cccaggaagt tgcaagagta ccatttgtcg
61 cacactcggg gaccgcgggt ggccggagga gatgaaaccg tcttggctgc agtgtcgtaa
121 agtcaccagc gccggggggc tcggagggcc cttgcctggg tcctctccgg cccggggagc
181 cggtgcggcc ctcagggctt tagtggtccc gggcccgcgg ggcggtctcg ggggccgggg
241 atgcagggca ctgtcctccg gcagtggcag cgagtacaag acccacttcg cagcctcggt
301 gaccgacccc gagaggttct ggggcaaagc tgccgagcag atcagctggt acaagccctg
361 gaccaaaacg ctggagaaca aacactcgcc ctctaccagg tggtttgtgg aaggaatgct
421 taacatttgt tacaatgccg ttgatcgtca tattgaaaat ggtaaagggg ataagattgc
481 tatcatctat gacagtcctg ttacaaacac taaagcaacc tttacctata aagaagttct
541 ggagcaggtc tccaagctgg ctggtgtctt ggtcaagcat ggcatcaaga aaggtgacac
601 tgtggttatc tacatgccta tgatcccaca ggcgatgtat accatgttgg catgtgcaag
661 gataggtgcc atccacagtc tcatatttgg aggatttgct tccaaagaac taagtagtcg
721 cattgatcat gtaaagccca aggtggttgt tacagcatca tttggcattg aacctggaag
781 gagggtagag tacgtaccac ttgtagaaga agcgctaaaa ataggacaac acaaaccaga
841 caaaattctc atttataatc gtccaaatat ggaggcggtt cctttggctc ccggtcgtga
901 ccttgattgg gatgaagaga tggcaaaagc ccagtcacat gactgtgttc ctgttctttc
961 agaacaccca ctgtatattc tttacacatc tggcacaacg gggttaccta agggtgtgat
1021 taggcccact gggggatacg ctgtcatgct acactggtca atgtcttcca tatacggact
1081 tcaacccgga gaggtgtggt gggcagcttc tgacttaggc tgggttgttg gacattccta
1141 tatctgctat ggacctcttc ttcatgggaa cacaacagtt ttatatgagg ggaagcctgt
1201 gggaacacca gatgctggcg cttatttccg tgtgcttgca gagcatggag tagctgcctt
1261 gtttacagca ccaactgcaa ttagagcaat ccgtcaacag gaccctgggg cagctttggg
1321 gaagcagtac tctctgacaa ggttcaaaac attatttgtg gctggagaac gatgtgatgt
1381 agagaccctg gaatggtcca aaaatgtctt cagagtacct gtcttagacc attggtggca
1441 aactgagact ggatctccaa ttactgcgtc atgtgttgga ttaggcaatt ctaaaacacc
1501 tccaccaggg caagcaggaa aaagcgtccc aggatacaat gttatgattt tggatgacaa
1561 catgcaaaaa ctgaaggctc ggtgtttagg aaatattgtg gtaaagttac cattgccacc
1621 tggggctttt tcaggactct ggaagaatca ggaagcattc aagcatttat actttgaaaa
1681 atttcctgga tattatgata ccatggatgc tggttacatg gatgaagaag gctatttgta
1741 tgttatgtct cgagtggatg atgtaataaa tgttgcaggt cacagaattt ctgcaggcgc
1801 cattgaagag tcaatccttt cccatggtac cgtggcagac tgtgctgttg ttggcaagga
1861 agatccctta aaaggtcatg tccccttagc actctgtgta ttgagaaaag atataaatgc
1921 aacagaggag caagttttgg aagaaattgt gaaacacgtt agacagaaca ttggccctgt
1981 ggctgctttt cgaaatgcag tgtttgtcaa acagctaccc aaaaccagat ctggcaagat
2041 cccccgatca gctttatctg ccattgtcaa tggcaagcca tacaagataa cttctacaat
2101 tgaagacccc agcatttttg gccacgtaga agaaatgctg aagcaagcat aatgagtttg
2161 tcttattcct attttgagtt gatttaattt cttaattgaa attaaattat ttgagttgtt
2221 tctcagaaat aaatatttca gtagaaatta cttgcaaaat gaaatgtgaa ttgtaaaact
2281 tggcctaaac aaatctaatg aaaacaaaaa aaaaaaaaaa aaa
//