LOCUS BC009307 1902 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens PHD finger protein 15, mRNA (cDNA clone IMAGE:4301096), partial cds. ACCESSION BC009307 VERSION BC009307.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1902) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1902) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC009307.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: o Column: 7. FEATURES Location/Qualifiers source 1..1902 /db_xref="H-InvDB:HIT000087249" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4301096" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1902 /gene="PHF15" /gene_synonym="KIAA0239" /db_xref="GeneID:23338" CDS <1..1725 /gene="PHF15" /gene_synonym="KIAA0239" /codon_start=1 /product="PHF15 protein" /protein_id="AAH09307.2" /db_xref="GeneID:23338" /translation="VFCDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKCLLCPKR GGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECT GTCIQCSMPSCVTAFHVTCAFDHGLEMRTILADNDEVKFKSFCQEHSDGGPRNEPTSE PTEPSQAGEDLEKVTLRKQRLQQLEEDFYELVEPAEVAERLDLAEALVDFIYQYWKLK RKANANQPLLTPKTDEVDNLAQQEQDVLYRRLKLFTHLRQDLERVRNLCYMVTRRERT KHAICKLQEQIFHLQMKLIEQDLCRGLSTSFPIDGTFFNSWLAQSVQITAENMAMSEW PLNNGHREDPAPGLLSEELLQDEETLLSFMRDPSLRPGDPARKARGRTRLPAKKKPPP PPPQDGPGSRTTPDKAPKKTWGQDAGSGKGGQGPPTRKPPRRTSSHLPSSPAAGDCPI LATPESPPPLAPETPDEAASVAADSDVQVPGPAASPKPLGRLRPPRESKVTRRLPGAR PDAGMGPPSAVAERPKVSLHFDTETDGYFSDGEMSDSDVEAEDGGVQRGPREAGAEEV VRMGVLAS" misc_feature 1..90 /gene="PHF15" /gene_synonym="KIAA0239" /note="PHD; Region: PHD-finger. PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains" /db_xref="CDD:pfam00628" BASE COUNT 430 a 588 c 556 g 328 t ORIGIN 1 gtcttctgtg acaagtgcaa cgtctgtgtg catcaggcat gctacgggat cctcaaggtg 61 cccacgggca gctggctgtg ccggacgtgt gccctgggtg tccagccaaa gtgcctgctc 121 tgccccaagc gaggaggagc cttgaagccc actagaagtg ggaccaagtg ggtgcatgtc 181 agctgtgccc tatggattcc tgaggtcagc atcggctgcc cagagaagat ggagcccatc 241 accaagatct cgcatatccc agccagccgc tgggctctgt cctgcagcct ctgcaaggaa 301 tgcacaggca cctgcatcca gtgttccatg ccttcctgcg tcacagcgtt ccatgtcaca 361 tgcgcctttg accacggcct ggaaatgcgg actatattag cagacaacga tgaggtcaag 421 ttcaagtcat tctgccagga gcacagtgac gggggcccac gtaatgagcc cacatctgag 481 cccacggaac ccagccaggc tggcgaggac ctggaaaagg tgaccctgcg caagcagcgg 541 ctgcagcagc tagaggagga cttctacgag ctggtggagc cggctgaggt ggctgagcgg 601 ctggacctgg ctgaggcact ggtcgacttc atctaccagt actggaagct gaagaggaaa 661 gccaatgcca accagccgct gctgaccccc aagaccgacg aggtggacaa cctggcccag 721 caggagcagg acgtcctcta ccgccgcctg aagctcttca cccatctgcg gcaggaccta 781 gagagggtta gaaatctgtg ctacatggtg acaaggcgcg agagaacgaa acacgccatc 841 tgcaaactcc aggagcagat attccacctg cagatgaaac ttattgaaca ggatctgtgt 901 cgaggcctgt ccacctcatt ccccatcgat ggcaccttct tcaacagctg gctggcacag 961 tcggtgcaga tcacagcaga gaacatggcc atgagcgagt ggccactgaa caatgggcac 1021 cgcgaggacc ctgctccagg gctgctgtca gaggaactgc tgcaggacga ggagacactg 1081 ctcagcttca tgcgggaccc ctcgctgcga cctggtgacc ctgctaggaa ggcccgaggc 1141 cgcacccgcc tgcctgccaa gaagaaacca ccaccaccac caccgcagga cgggcctggt 1201 tcacggacga ctccagacaa agcccccaag aagacctggg gccaggatgc aggcagtggc 1261 aaggggggtc aagggccacc taccaggaag ccaccacgtc ggacatcttc tcacttgccg 1321 tccagccctg cagccgggga ctgtcccatc ctagccaccc ctgaaagccc cccgccactg 1381 gcccctgaga ccccggacga ggcagcctca gtagctgctg actcagatgt ccaagtgcct 1441 ggccctgcag caagccctaa gcctttgggc cggctccggc caccccgcga gagcaaggta 1501 acccggagat tgccgggtgc caggcctgat gctgggatgg gaccaccttc agctgtggct 1561 gagaggccca aggtcagcct gcattttgac actgagactg atggctactt ctctgatggg 1621 gagatgagcg actcagatgt agaggccgag gacggtgggg tgcagcgggg tccccgggag 1681 gcaggggcag aggaggtggt ccgcatgggc gtactggcct cctaactcac ccccttccct 1741 gtcccaggcc ctgccctggt ccccccacaa ggcctcagcc cagtcacaac tgccatttcc 1801 agtctctgct gagtgtccca gaccctcgag gctgccactc cgtcgtggtt ttatttttaa 1861 tatagagaga gttttgaatt ctaaaaaaaa aaaaaaaaaa aa //