LOCUS       BC009268                3144 bp    mRNA    linear   HUM 21-OCT-2003
DEFINITION  Homo sapiens SET binding factor 1, mRNA (cDNA clone IMAGE:3028662),
            partial cds.
ACCESSION   BC009268
VERSION     BC009268.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
            Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
            Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
            Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
            Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
            Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
            Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
            George Yang, Scott Zuyderduyn, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 22 Row: f Column: 18.
FEATURES             Location/Qualifiers
     source          1..3144
                     /db_xref="H-InvDB:HIT000087238"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3028662"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..3144
                     /gene="SBF1"
                     /gene_synonym="MTMR5"
                     /db_xref="GeneID:6305"
                     /db_xref="MIM:603560"
     CDS             <1..2794
                     /gene="SBF1"
                     /gene_synonym="MTMR5"
                     /codon_start=2
                     /product="SBF1 protein"
                     /protein_id="AAH09268.2"
                     /db_xref="GeneID:6305"
                     /db_xref="MIM:603560"
                     /translation="FTGMPTDPLVGEQVVVRSFPVAALTKEKRISVQTPVDQLLQDGL
                     QLRSCTFQLLKMAFDEEVGSDSAELFRKQLHKLRYPPDIRATFAFTLGSAHTPGRPPR
                     VTKDKGPSLRTLSRNLVKNAKKTIGRQHVTRKKYNPPSWEHRGQPPPEDQEDEISVSE
                     ELEPSTLTPSSALKPSDRMTMSSLVERACCRDYQRLGLGTLSSSLSRAKSEPFRISPV
                     NRMYAICRSYPGLLIVPQSVQDNALQRVSRCYRQNRFPVVCWRSGRSKAVLLRSGGLH
                     GKGVVGLFKAQNAPSPGQSQADSSSLEQEKYLQAVVSSMPRYADASGRNTLSGFSSAH
                     MGSHGKWGSVRTSGRSSGLGTDVGSRLAGRDALAPPQANGGPPDPGFLRPQRAALYIL
                     GDKAQLKGVRSDPLQQWELVPIEVFEARQVKASFKKLLKACVPGCPAAEPSPASFLRS
                     LEDSEWLIQIHKLLQVSVLVVELLDSGSSVLVGLEDGWDITTQVVSLVQLLSDPFYRT
                     LEGFRLLVEKEWLSFGHRFSHRGAHTLAGQSSGFTPVFLQFLDCVHQVHLQFPMEFEF
                     SQFYLKFLGYHHVSRRFRTFLLDSDYERIELGLLYEEKGERRGQVPCRSVWEYVDRLS
                     KRTPVFHNYMYAPEDAEVLRPYSNVSNLKVWDFYTEETLAEGPPYDWELAQGPPEPPE
                     EERSDGGAPQSRRRVVWPCYDSCPRAQPDAISRLLEELQRLETELGQPAERWKDTWDR
                     VKAAQRLEGRPDGRGTPSSLLVSTAPHHRRSLGVYLQEGPVGSTLSLSLDSDQSSGST
                     TSGSRQAARRSTSTLYSQFQTAESENRSYEGTLYKKGAFMKPWKARWFVLDKTKHQLR
                     YYDHRVDTECKGVIDLAEVEAVAPGTPTMGAPKTVDEKAFFDVKTTRRVYNFCAQDVP
                     SAQQWVDRIQSCLSDA"
     misc_feature    2480..2791
                     /gene="SBF1"
                     /gene_synonym="MTMR5"
                     /note="PH; Region: Pleckstrin homology domain. Domain
                     commonly found in eukaryotic signalling proteins. The
                     domain family possesses multiple functions including the
                     abilities to bind inositol phosphates, and various
                     proteins. PH domains have been found to possess inserted
                     domains (such as in PLC gamma, syntrophins) and to be
                     inserted within other domains. Mutations in Brutons
                     tyrosine kinase (Btk) within its PH domain cause X-linked
                     agammaglobulinaemia (XLA) in patients. Point mutations
                     cluster into the positively charged end of the molecule
                     around the predicted binding site for phosphatidylinositol
                     lipids"
                     /db_xref="CDD:smart00233"
BASE COUNT          582 a         1041 c          980 g          541 t
ORIGIN      
        1 cttcacgggg atgcccacgg accccctggt tggggagcag gtggtggtcc gctccttccc
       61 ggtggctgcg ctgaccaagg agaagcgcat cagcgtccag acccctgtgg accagctcct
      121 gcaggacggg ctccagctgc gctcctgcac attccagctg ctgaaaatgg cctttgacga
      181 ggaggtgggg tctgacagcg ccgagctctt ccgtaagcag ctgcataagc tgcggtaccc
      241 gccggacatc agggccacct ttgcgttcac cttgggctct gcccacacac ctggccggcc
      301 accgcgagtc accaaggaca agggtccttc cctcagaacc ctgtcccgga acctggtcaa
      361 gaacgccaag aagaccatcg ggcggcagca tgtcactcgc aagaagtaca acccccccag
      421 ctgggagcac cggggccagc cgccccctga ggaccaggag gacgagatct cagtgtcgga
      481 ggagctggag cccagcacgc tgaccccgtc ctcagccctg aagccctccg accgcatgac
      541 catgagcagc ctggtggaaa gggcttgctg tcgcgactac cagcgcctcg gtctgggcac
      601 cctgagcagc agcctgagcc gggccaagtc tgagcccttc cgcatttctc cggtcaaccg
      661 catgtatgcc atctgccgca gctacccagg gctgctgatc gtgccccaga gtgtccagga
      721 caacgccctg cagcgcgtgt cccgctgcta ccgccagaac cgcttccccg tggtctgctg
      781 gcgcagcggg cggtccaagg cggtgctgct gcgctctgga ggcctgcatg gcaaaggtgt
      841 cgtcggcctc ttcaaggccc agaacgcacc ttctccaggc cagtcccagg cggactcgag
      901 tagcctggag caggagaagt acctgcaggc tgtggtcagc tccatgcccc gctacgccga
      961 cgcgtcggga cgcaacacgc ttagcggctt ctcctcagcc cacatgggca gtcacggtaa
     1021 gtggggcagt gtccggacca gtggacgcag cagtggcctt ggcaccgatg tgggctcccg
     1081 gctagctggc agagacgcgc tggccccacc ccaggccaac gggggccctc ccgacccggg
     1141 cttcctgcgt ccgcagcgag cagccctcta tatccttggg gacaaagccc agctcaaggg
     1201 tgtgcggtca gaccccctgc agcagtggga gctggtgccc attgaggtat tcgaggcacg
     1261 gcaggtgaag gctagcttca agaagctgct gaaagcatgt gtcccaggct gccccgctgc
     1321 tgagcccagc ccagcctcct tcctgcgctc actggaggac tcagagtggc tgatccagat
     1381 ccacaagctg ctgcaggtgt ctgtgctggt ggtggagctc ctggattcag gctcctccgt
     1441 gctggtgggc ctggaggatg gctgggacat caccacccag gtggtatcct tggtgcagct
     1501 gctctcagac cccttctacc gcacgctgga gggctttcgc ctgctggtgg agaaggagtg
     1561 gctgtccttc ggccatcgct tcagccaccg tggagctcac accctggccg ggcagagcag
     1621 cggcttcaca cccgtcttcc tgcagttcct ggactgcgta caccaggtcc acctgcagtt
     1681 ccccatggag tttgagttca gccagttcta cctcaagttc ctcggctacc accatgtgtc
     1741 ccgccgtttc cggaccttcc tgctcgactc tgactatgag cgcattgagc tggggctgct
     1801 gtatgaggag aagggggaac gcaggggcca ggtgccgtgc aggtctgtgt gggagtatgt
     1861 ggaccggctg agcaagagga cgcctgtgtt ccacaattac atgtatgcgc ccgaggacgc
     1921 agaggtcctg cggccctaca gcaacgtgtc caacctgaag gtgtgggact tctacactga
     1981 ggagacgctg gccgagggcc ctccctatga ctgggaactg gcccaggggc cccctgaacc
     2041 cccagaggaa gaacggtctg atggaggcgc tccccagagc aggcgccgcg tggtgtggcc
     2101 ctgttacgac agctgcccgc gggcccagcc tgacgccatc tcacgcctgc tggaggagct
     2161 gcagaggctg gagacagagt tgggccaacc cgctgagcgc tggaaggaca cctgggaccg
     2221 ggtgaaggct gcacagcgcc tcgagggccg gccagacggc cgtggcaccc ctagctccct
     2281 ccttgtgtcc accgcacccc accaccgtcg ctcgctgggt gtgtacctgc aggaggggcc
     2341 cgtgggctcc accctgagcc tcagcctgga cagcgaccag agtagtggct caaccacatc
     2401 cggctcccgt caggctgccc gccgcagcac cagcaccctg tacagccagt tccagacagc
     2461 agagagtgag aacaggtcct acgagggcac tctgtacaag aagggggcct tcatgaagcc
     2521 ttggaaggcc cgctggttcg tgctggacaa gaccaagcac cagctgcgct actacgacca
     2581 ccgtgtggac acagagtgca agggtgtcat cgacttggcg gaggtggagg ctgtggcacc
     2641 tggcacgccc actatgggtg cccctaagac tgtggacgag aaggccttct ttgacgtgaa
     2701 gacaacgcgt cgcgtttaca acttctgtgc ccaggacgtg ccctcggccc agcagtgggt
     2761 ggaccggatc cagagctgcc tgtcggacgc ctgagcctcc cagccctgcc cggctgctct
     2821 gcttccggtc gttaccgacc actaggggtg ggcagggccg ccccggccat gtttacagcc
     2881 ccggccctcg acagtattga ggccccgagc ccccagcact tgtgtgtaca gcccccgtcc
     2941 ccgccccgcc ccgcccggcc ggccctaact tattttggcg tcacagctga gcaccgtgcc
     3001 gggaggtggc caaggtacag cccgcaatgg gcctgtaaat agtccggccc cgtcagcgtg
     3061 tgctggtcca gccagcggct gcaggcgagt ttctagaacc agagtctata taaagagaga
     3121 actaacaaaa aaaaaaaaaa aaaa
//