LOCUS BC009247 1815 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation factor 1, mRNA (cDNA clone MGC:3958
IMAGE:2963635), complete cds.
ACCESSION BC009247
VERSION BC009247.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1815)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1815)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009247.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66879658.
FEATURES Location/Qualifiers
source 1..1815
/db_xref="H-InvDB:HIT000034227"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3958 IMAGE:2963635"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1815
/gene="ARF1"
/db_xref="GeneID:375"
/db_xref="HGNC:HGNC:652"
/db_xref="MIM:103180"
CDS 56..601
/gene="ARF1"
/codon_start=1
/product="ADP-ribosylation factor 1"
/protein_id="AAH09247.1"
/db_xref="GeneID:375"
/db_xref="HGNC:HGNC:652"
/db_xref="MIM:103180"
/translation="MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVT
TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNE
AREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCA
TSGDGLYEGLDWLSNQLRNQK"
BASE COUNT 416 a 505 c 464 g 430 t
ORIGIN
1 ggagcagcag cctctgaggt gtccctggcc agtgtccttc cacctgtcca caagcatggg
61 gaacatcttc gccaacctct tcaagggcct ttttggcaaa aaagaaatgc gcatcctcat
121 ggtgggcctg gatgctgcag ggaagaccac gatcctctac aagcttaagc tgggtgagat
181 cgtgaccacc attcccacca taggcttcaa cgtggaaacc gtggagtaca agaacatcag
241 cttcactgtg tgggacgtgg gtggccagga caagatccgg cccctgtggc gccactactt
301 ccagaacaca caaggcctga tcttcgtggt ggacagcaat gacagagagc gtgtgaacga
361 ggcccgtgag gagctcatga ggatgctggc cgaggacgag ctccgggatg ctgtcctcct
421 ggtgttcgcc aacaagcagg acctccccaa cgccatgaat gcggccgaga tcacagacaa
481 gctggggctg cactcactac gccacaggaa ctggtacatt caggccacct gcgccaccag
541 cggcgacggg ctctatgaag gactggactg gctgtccaat cagctccgga accagaagtg
601 aacgcgaccc ccctccctct cactcctctt gccctctgct ttactctcat gtggcaaacg
661 tgcggctcgt ggtgtgagtg ccagaagctg cctccgtggt ttggtcaccg tgtgcatcgc
721 accgtgctgt aaatgtggca gacgcagcct gcggccaggc tttttattta atgtaaatag
781 tttttgtttc caatgaggca gtttctggta ctcctatgca atattactca gcttttttta
841 ttgtaaaaag aaaaatcaac tcactgttca gtgctgagag gggatgtagg cccatgggca
901 cctggcctcc aggagtcgct gtgttgggag agccggccac gcccttggct ttagagctgt
961 gttgaaatcc attttggtgg ttggttttta acccaaactc agtgcatttt ttaaaatagt
1021 taagaatcca agtcgagaac acttgaacac acagaaggga gaccccgcct agcatagatt
1081 tgcagttacg gcctggatgc cagtcgccag cccagctgtt cccctcggga acatgaggtg
1141 gtggtggcgc agcagactgc gatcaattct gcatggtcac agtagagatc cccgcaactc
1201 gcttgtcctt gggtcaccct gcattccata gccatgtgct tgtccctgtg ctcccacggt
1261 tcccaggggc caggctggga gcccacagcc accccactat gccgcaggcc gccctaccca
1321 ccttcaggca gcctatggga cgcagggccc catctgtccc tcggtcgccg tgtggccaga
1381 gtgggtccgt cgtccccaac actcgtgctc gctcagacac tttggcagga tgtctggggc
1441 ctcaccagca ggagcgcgtg caagccgggc aggcggtcca cctagaccca cagcccctcg
1501 ggagcacccc acctctgtgt gtgatgtagc tttctctccc tcagcctgca agggtccgat
1561 ttgccatcga aaaagacaac ctctactttt ttcttttgta ttttgataaa cactgaagct
1621 ggagctgtta aatttatctt ggggaaacct cagaactggt ctatttggtg tcgtggaacc
1681 tcttactgct ttcaatacac gattagtaat caactgtttt gtatacttgt tttcagtttt
1741 catttcgaca aacaagcact gtaattatag ctattagaat aaaatctctt aactattaaa
1801 aaaaaaaaaa aaaaa
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