LOCUS BC009242 1481 bp mRNA linear HUM 07-AUG-2008
DEFINITION Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:3029414), partial
cds.
ACCESSION BC009242
VERSION BC009242.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1481)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1481)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009242.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5032284.
FEATURES Location/Qualifiers
source 1..1481
/db_xref="H-InvDB:HIT000087235"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3029414"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1481
/gene="DMD"
/gene_synonym="BMD"
/gene_synonym="CMD3B"
/gene_synonym="DXS142"
/gene_synonym="DXS164"
/gene_synonym="DXS206"
/gene_synonym="DXS230"
/gene_synonym="DXS239"
/gene_synonym="DXS268"
/gene_synonym="DXS269"
/gene_synonym="DXS270"
/gene_synonym="DXS272"
/db_xref="GeneID:1756"
/db_xref="HGNC:HGNC:2928"
/db_xref="MIM:300377"
CDS 94..>1481
/gene="DMD"
/gene_synonym="BMD"
/gene_synonym="CMD3B"
/gene_synonym="DXS142"
/gene_synonym="DXS164"
/gene_synonym="DXS206"
/gene_synonym="DXS230"
/gene_synonym="DXS239"
/gene_synonym="DXS268"
/gene_synonym="DXS269"
/gene_synonym="DXS270"
/gene_synonym="DXS272"
/codon_start=1
/product="DMD protein"
/protein_id="AAH09242.1"
/db_xref="GeneID:1756"
/db_xref="HGNC:HGNC:2928"
/db_xref="MIM:300377"
/translation="MEDEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLD
LLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGL
IWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLA
LNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKK
SILMYITSLFQVLPQQVSIEAIQEVEMLPRPPKVTKEEHFQLHHQMHYSQQITVSLAQ
GYERTSSPKPRFKSYAYTQAAYVTTSDPTRSPFPSQHLEAPEDKSFGSSLMESEVNLD
RYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNIL
QLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQKLK
ELNDWLTKKKKK"
BASE COUNT 503 a 297 c 323 g 358 t
ORIGIN
1 cagaatcagg agaaagatgc tgttttgcac tatcttgatt tgttacagca gccaacttat
61 tggcatgatg gagtgacagg aaaaacagct ggcatggaag atgaaagaga agatgttcaa
121 aagaaaacat tcacaaaatg ggtaaatgca caattttcta agtttgggaa gcagcatatt
181 gagaacctct tcagtgacct acaggatggg aggcgcctcc tagacctcct cgaaggcctg
241 acagggcaaa aactgccaaa agaaaaagga tccacaagag ttcatgccct gaacaatgtc
301 aacaaggcac tgcgggtttt gcagaacaat aatgttgatt tagtgaatat tggaagtact
361 gacatcgtag atggaaatca taaactgact cttggtttga tttggaatat aatcctccac
421 tggcaggtca aaaatgtaat gaaaaatatc atggctggat tgcaacaaac caacagtgaa
481 aagattctcc tgagctgggt ccgacaatca actcgtaatt atccacaggt taatgtaatc
541 aacttcacca ccagctggtc tgatggcctg gctttgaatg ctctcatcca tagtcatagg
601 ccagacctat ttgactggaa tagtgtggtt tgccagcagt cagccacaca acgactggaa
661 catgcattca acatcgccag atatcaatta ggcatagaga aactactcga tcctgaagat
721 gttgatacca cctatccaga taagaagtcc atcttaatgt acatcacatc actcttccaa
781 gttttgcctc aacaagtgag cattgaagcc atccaggaag tggaaatgtt gccaaggcca
841 cctaaagtga ctaaagaaga acattttcag ttacatcatc aaatgcacta ttctcaacag
901 atcacggtca gtctagcaca gggatatgag agaacttctt cccctaagcc tcgattcaag
961 agctatgcct acacacaggc tgcttatgtc accacctctg accctacacg gagcccattt
1021 ccttcacagc atttggaagc tcctgaagac aagtcatttg gcagttcatt gatggagagt
1081 gaagtaaacc tggaccgtta tcaaacagct ttagaagaag tattatcgtg gcttctttct
1141 gctgaggaca cattgcaagc acaaggagag atttctaatg atgtggaagt ggtgaaagac
1201 cagtttcata ctcatgaggg gtacatgatg gatttgacag cccatcaggg ccgggttggt
1261 aatattctac aattgggaag taagctgatt ggaacaggaa aattatcaga agatgaagaa
1321 actgaagtac aagagcagat gaatctccta aattcaagat gggaatgcct cagggtagct
1381 agcatggaaa aacaaagcaa tttacataga gttttaatgg atctccagaa tcagaaactg
1441 aaagagttga atgactggct aacaaaaaaa aaaaaaaaaa a
//