LOCUS BC009224 1513 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens synaptotagmin-like 1, mRNA (cDNA clone IMAGE:3942111),
partial cds.
ACCESSION BC009224
VERSION BC009224.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1513)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1513)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC009224.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: f Column: 6.
FEATURES Location/Qualifiers
source 1..1513
/db_xref="H-InvDB:HIT000087228"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3942111"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1513
/gene="SYTL1"
/gene_synonym="FLJ14996"
/gene_synonym="JFC1"
/db_xref="GeneID:84958"
/db_xref="MIM:608042"
CDS <1..1417
/gene="SYTL1"
/gene_synonym="FLJ14996"
/gene_synonym="JFC1"
/codon_start=2
/product="SYTL1 protein"
/protein_id="AAH09224.2"
/db_xref="GeneID:84958"
/db_xref="MIM:608042"
/translation="HHNAHFGSDLVRASMRRKKSTRGDQAPGHDREAEAAVKEKEEGP
EPRLTIDEAPQERLRETEGPDFPSPSVPLKASDPEEASQAQEDPGQGDQQVCAEEADP
ELEPASGGEQEPRPQQAQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTLS
GSQMSLSGDAEAVQVRGSVHFALHYEPGAAELRVHVIQCQGLAAARRRRSDPYVKSYL
LPDKQSKRKTAVKKRNLNPVFNETLRYSVPQAELQGRVLSLSVWHRESLGRNIFLGEV
EVPLDTWDWGSEPTWLPLQPRVPPSPDDLPSRGLLALSLKYVPAGSEGAGLPPSGELH
FWVKEARDLLPLRAGSLDTYVQCFVLPDDSRASRQRTRVVRRSLSPVFNHTMVYDGFG
PADLRQACAELSLWDHGALANRQLGGTRLSLGTGSSYGLQVPWMDSTPEEKQLWQALL
EQPCEWVDGLLPLRTNLAPRT"
BASE COUNT 295 a 509 c 472 g 237 t
ORIGIN
1 gcaccacaat gcccacttcg gctctgacct tgtccgagcg tctatgcgca ggaagaagag
61 caccagggga gaccaggctc caggccacga cagggaggct gaggctgctg tgaaagagaa
121 ggaagagggg ccagagccca ggctcaccat tgatgaggcc cctcaggaga ggctcaggga
181 gactgaggga cctgatttcc catcgccttc tgtcccccta aaggcttcag atcctgagga
241 ggcgtcccag gcccaggaag atcctggcca aggagaccaa caggtctgtg ccgaggaggc
301 tgacccggag ctggagcccg cgtcgggggg agagcaggag ccgcggcccc agcaagccca
361 gaccaaggcc gcgtcccaga tcctggagaa tggggaggag gccccggggc ccgacccctc
421 tctcgaccgc atgctcagca gcagctcctc ggtgtccagc cttaactcct ccacgctgag
481 cggcagccag atgagcctgt caggcgacgc ggaggcggtg caggtccgcg gctccgtgca
541 cttcgcgctg cactacgagc cgggcgccgc cgagctgcgc gtgcacgtga tccagtgcca
601 gggcctggcc gccgcccggc gccgccgctc ggacccctac gtcaaaagct acctcctccc
661 ggataagcag agcaagcgca aaacggcggt gaagaaacgg aatctgaatc cggttttcaa
721 cgagactctc cggtactccg tcccgcaggc cgagcttcag ggccgcgtgc tgagcctgtc
781 tgtgtggcac cgcgaaagcc tgggtcgcaa catctttctg ggcgaagttg aagtgcccct
841 ggacacgtgg gactggggct ctgagcccac ctggctcccc ctgcagcccc gggtcccacc
901 ctctcccgac gaccttccga gccgcgggtt actcgccctg tccctcaagt acgtccccgc
961 cggctccgag ggcgcaggac tgcccccgag cggggagctg cacttctggg tgaaggaggc
1021 tcgggacctc ctgccgctgc gggcaggatc cctggacact tacgtacaat gcttcgtgct
1081 gcctgatgac agccgggcca gccgccagcg tacaagggtt gtgcgacgca gcctcagccc
1141 tgtgttcaat cacaccatgg tgtacgatgg ctttgggcct gctgacctgc gccaggcttg
1201 tgccgagctc tccctctggg accatggggc cctggccaac cgccagctgg gaggcacacg
1261 cctcagcctg ggcaccggca gcagctatgg gctgcaggtg ccctggatgg attccacacc
1321 tgaggagaag cagctgtggc aagccctcct ggagcagccg tgcgagtggg tggatggcct
1381 tctacccctc agaaccaacc tggcccccag gacgtagccc caccaagcct ctctctctgg
1441 acccccatct cagggcctgc ccttggctaa agtcaataaa gtctattcta agagcaaaaa
1501 aaaaaaaaaa aaa
//