LOCUS BC009192 907 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LSM2 homolog, U6 small nuclear RNA associated (S.
cerevisiae), mRNA (cDNA clone MGC:15227 IMAGE:3842537), complete
cds.
ACCESSION BC009192
VERSION BC009192.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 907)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 907)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009192.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34013512.
FEATURES Location/Qualifiers
source 1..907
/db_xref="H-InvDB:HIT000034189_09"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15227 IMAGE:3842537"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..907
/gene="LSM2"
/gene_synonym="G7b"
/gene_synonym="snRNP"
/gene_synonym="YBL026W"
/db_xref="GeneID:57819"
/db_xref="HGNC:HGNC:13940"
/db_xref="MIM:607282"
CDS 210..497
/gene="LSM2"
/gene_synonym="G7b"
/gene_synonym="snRNP"
/gene_synonym="YBL026W"
/codon_start=1
/product="LSM2 homolog, U6 small nuclear RNA associated
(S. cerevisiae)"
/protein_id="AAH09192.1"
/db_xref="GeneID:57819"
/db_xref="HGNC:HGNC:13940"
/db_xref="MIM:607282"
/translation="MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDIS
VTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ"
BASE COUNT 227 a 251 c 213 g 216 t
ORIGIN
1 ctcctctcta ctctacccag cttgcgctcc ccagccgcaa gtcggccgcg ctttgcccgt
61 cagcgcttgg agctttctgc gtcgcttccc gctgcgcctg cgcggtcccg cctcgcccca
121 cgcgcgggct cgcgcttcgg tttccccaga cctgctcgca gcaccctgct gtcttcccgg
181 tccggcccgc tgcccgcggc gccagcacca tgctcttcta ttcttttttc aagtcccttg
241 tgggcaagga tgtggtcgtg gaactaaaga atgacctgag catctgtgga accctccatt
301 ctgtggatca gtatctcaac atcaaactaa ctgacatcag tgtcacagac cctgagaaat
361 accctcacat gttatcagtg aagaactgct tcattcgggg ctcagtggtc cgatacgtgc
421 agctgccagc agatgaggtc gacacacagt tgctacagga tgcggcaagg aaggaagccc
481 tgcagcagaa acagtgatgg ctcctcctcc tcttcccctc cctctttcat tggtgaccca
541 taaccccaag tcccagccca gaacccctaa cccccaatac ttgaaggggt tttgtttttt
601 tactaatgat ggttttgtgg gtttttttta agggatgagt ggatgagagg agtaataggg
661 aacagctatc ctctcttgag aaggggagga taagtaggct gggaaacttc aaagccttcc
721 cagtccccag cacctgcctt tctcactact tctctggaga tggtaggaga gtttcctagg
781 tctttccagg gcagcatgtg attcatttgg ggatggaagg aatctgtccc gcatcgggaa
841 taaaatttat gatgcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaaaaa
//