LOCUS BC009179 842 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens small nuclear ribonucleoprotein 25kDa (U11/U12), mRNA (cDNA clone MGC:14880 IMAGE:3946937), complete cds. ACCESSION BC009179 VERSION BC009179.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 842) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 842) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 25 Row: h Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52851417. FEATURES Location/Qualifiers source 1..842 /db_xref="H-InvDB:HIT000034183" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14880 IMAGE:3946937" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..842 /gene="SNRNP25" /db_xref="GeneID:79622" /db_xref="HGNC:HGNC:14161" CDS 113..511 /gene="SNRNP25" /codon_start=1 /product="small nuclear ribonucleoprotein 25kDa (U11/U12)" /protein_id="AAH09179.1" /db_xref="GeneID:79622" /db_xref="HGNC:HGNC:14161" /translation="MDVFQEGLAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVR VCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAG EKLTEDRKKLRDYGIRNRDEVSFIKKLRQK" BASE COUNT 225 a 216 c 250 g 151 t ORIGIN 1 ggcacgaggc cggctgagag gggcggccct ggaggagacg gaggcggcgg gtgggcccga 61 ggcgcaagag gaagatgagg acgaagaaga ggcgctgccg cactccgagg ccatggacgt 121 gttccaggag ggtctggcta tggtggtgca ggacccgctg ctctgcgatc tgccgatcca 181 ggttactctg gaagaagtca actcccaaat agccctagaa tacggccagg caatgacggt 241 ccgagtgtgc aagatggatg gagaagtaat gcccgtggtt gtagtgcaga gtgccacagt 301 cctggacctg aagaaggcca tccagagata cgtgcagctc aagcaggagc gtgaaggggg 361 cattcagcac atcagctggt cctacgtgtg gaggacgtac catctgacct ctgcaggaga 421 gaaactcacg gaagacagaa agaagctccg agactacggc atccggaatc gagacgaggt 481 ttccttcatc aaaaagctga ggcaaaagtg agcctccaga caggacaacc ctcttcatca 541 ctggtggctg agctttttcc cagcaggaat gggtcctcga atcatcgtgc ctctttcaca 601 gaaaggacgt tgtggtggcc tcaccccagg catgcccaac aggaactgtc agcataaacc 661 tgggggccct caggactagg acagggtgag ccagtgctcc ctcctttcat gtacttggcc 721 tgagactgac ctctccctag gtccaaatgc cctagtcaca tggcagaccc acggcctggc 781 ccactgtata aaataaacct gtttgcttct tagtttgaaa aaaaaaaaaa aaaaaaaaaa 841 aa //