LOCUS       BC009117                3275 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens brevican, mRNA (cDNA clone MGC:18150 IMAGE:4154474),
            complete cds.
ACCESSION   BC009117
VERSION     BC009117.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3275)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 19 Row: n Column: 16.
FEATURES             Location/Qualifiers
     source          1..3275
                     /db_xref="H-InvDB:HIT000034178"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:18150 IMAGE:4154474"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3275
                     /gene="BCAN"
                     /gene_synonym="BEHAB"
                     /gene_synonym="CSPG7"
                     /gene_synonym="MGC13038"
                     /db_xref="GeneID:63827"
                     /db_xref="HGNC:HGNC:23059"
                     /db_xref="MIM:600347"
     CDS             125..2860
                     /gene="BCAN"
                     /gene_synonym="BEHAB"
                     /gene_synonym="CSPG7"
                     /gene_synonym="MGC13038"
                     /codon_start=1
                     /product="brevican"
                     /protein_id="AAH09117.1"
                     /db_xref="GeneID:63827"
                     /db_xref="HGNC:HGNC:23059"
                     /db_xref="MIM:600347"
                     /translation="MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAP
                     LQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNE
                     AYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFL
                     YREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQ
                     TPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAY
                     CQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFL
                     FPNQTGFPNKHSRFNVYCFRDSAQPSAIPEASNPASNPASDGLEAIVTVTETLEELQL
                     PQEATESESRGAIYSIPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSEEEG
                     KALEEEEKYEDEEEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEKSLSQ
                     APARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVG
                     EATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSEDNSGRTAPAGTS
                     VQAQPVLPTDSASRGGVAVVPASGDCVPSPCHNGGTCLEEEEGVRCLCLPGYGGDLCD
                     VGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYR
                     EYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDV
                     PCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVLRYRCREGLAQRNLPLI
                     RCQENGRWEAPQISCVPRRPARALHPEEDPEGRQGRLLGRWKALLIPPSSPMPGP"
BASE COUNT          674 a         1016 c         1005 g          580 t
ORIGIN      
        1 gcagtctccg ccgcagtctc agctgcagct gcaggactga gccgtgcacc cggaggagac
       61 ccccggagga ggcgacaaac ttcgcagtgc cgcgacccaa ccccagccct gggtagcctg
      121 cagcatggcc cagctgttcc tgcccctgct ggcagccctg gtcctggccc aggctcctgc
      181 agctttagca gatgttctgg aaggagacag ctcagaggac cgcgcttttc gcgtgcgcat
      241 cgcgggcgac gcgccactgc agggcgtgct cggcggcgcc ctcaccatcc cttgccacgt
      301 ccactacctg cggccaccgc cgagccgccg ggctgtgctg ggctctccgc gggtcaagtg
      361 gactttcctg tcccggggcc gggaggcaga ggtgctggtg gcgcggggag tgcgcgtcaa
      421 ggtgaacgag gcctaccggt tccgcgtggc actgcctgcg tacccagcgt cgctcaccga
      481 cgtctccctg gcgctgagcg agctgcgccc caacgactcg ggtatctatc gctgtgaggt
      541 ccagcacggc atcgatgaca gcagcgacgc tgtggaggtc aaggtcaaag gggtcgtctt
      601 tctctaccga gagggctctg cccgctatgc tttctccttt tctggggccc aggaggcctg
      661 tgcccgcatt ggagcccaca tcgccacccc ggagcagctc tatgccgcct accttggggg
      721 ctatgagcaa tgtgatgctg gctggctgtc ggatcagacc gtgaggtatc ccatccagac
      781 cccacgagag gcctgttacg gagacatgga tggcttcccc ggggtccgga actatggtgt
      841 ggtggacccg gatgacctct atgatgtgta ctgttatgct gaagacctaa atggagaact
      901 gttcctgggt gaccctccag agaagctgac attggaggaa gcacgggcgt actgccagga
      961 gcggggtgca gagattgcca ccacgggcca actgtatgca gcctgggatg gtggcctgga
     1021 ccactgcagc ccagggtggc tagctgatgg cagtgtgcgc taccccatcg tcacacccag
     1081 ccagcgctgt ggtgggggct tgcctggtgt caagactctc ttcctcttcc ccaaccagac
     1141 tggcttcccc aataagcaca gccgcttcaa cgtctactgc ttccgagact cggcccagcc
     1201 ttctgccatc cctgaggcct ccaacccagc ctccaaccca gcctctgatg gactagaggc
     1261 tatcgtcaca gtgacagaga ccctggagga actgcagctg cctcaggaag ccacagagag
     1321 tgaatcccgt ggggccatct actccatccc catcatggag gacggaggag gtggaagctc
     1381 cactccagaa gacccagcag aggcccctag gacgctccta gaatttgaaa cacaatccat
     1441 ggtaccgccc acggggttct cagaagagga aggtaaggca ttggaggaag aagagaaata
     1501 tgaagatgaa gaagagaaag aggaggaaga agaagaggag gaggtggagg atgaggctct
     1561 gtgggcatgg cccagcgagc tcagcagccc gggccctgag gcctctctcc ccactgagcc
     1621 agcagcccag gagaagtcac tctcccaggc gccagcaagg gcagtcctgc agcctggtgc
     1681 atcaccactt cctgatggag agtcagaagc ttccaggcct ccaagggtcc atggaccacc
     1741 tactgagact ctgcccactc ccagggagag gaacctagca tccccatcac cttccactct
     1801 ggttgaggca agagaggtgg gggaggcaac tggtggtcct gagctatctg gggtccctcg
     1861 aggagagagc gaggagacag gaagctccga gggtgcccct tccctgcttc cagccacacg
     1921 ggcccctgag ggtaccaggg agctggaggc cccctctgaa gataattctg gaagaactgc
     1981 cccagcaggg acctcagtgc aggcccagcc agtgctgccc actgacagcg ccagccgagg
     2041 tggagtggcc gtggtccccg catcaggtga ctgtgtcccc agcccctgcc acaatggtgg
     2101 gacatgcttg gaggaggagg aaggggtccg ctgcctatgt ctgcctggct atggggggga
     2161 cctgtgcgat gttggcctcc gcttctgcaa ccccggctgg gacgccttcc agggcgcctg
     2221 ctacaagcac ttttccacac gaaggagctg ggaggaggca gagacccagt gccggatgta
     2281 cggcgcgcat ctggccagca tcagcacacc cgaggaacag gacttcatca acaaccggta
     2341 ccgggagtac cagtggatcg gactcaacga caggaccatc gaaggcgact tcttgtggtc
     2401 ggatggcgtc cccctgctct atgagaactg gaaccctggg cagcctgaca gctacttcct
     2461 gtctggagag aactgcgtgg tcatggtgtg gcatgatcag ggacaatgga gtgacgtgcc
     2521 ctgcaactac cacctgtcct acacctgcaa gatggggctg gtgtcctgtg ggccgccacc
     2581 ggagctgccc ctggctcaag tgttcggccg cccacggctg cgctatgagg tggacactgt
     2641 gcttcgctac cggtgccggg aaggactggc ccagcgcaat ctgccgctga tccgatgcca
     2701 agagaacggt cgttgggagg ccccccagat ctcctgtgtg cccagaagac ctgcccgagc
     2761 tctgcaccca gaggaggacc cagaaggacg tcaggggagg ctactgggac gctggaaggc
     2821 gctgttgatc cccccttcca gccccatgcc aggtccctag ggggcaaggc cttgaacact
     2881 gccggccaca gcactgccct gtcacccaaa ttttccctca caccctgcgc tcccgccacc
     2941 acaggaagtg acaacatgac gaggggtggt gctggagtcc aggtgacagt tcctgaaggg
     3001 gcttctggga aatacctagg aggctccagc ccagcccagg ccctctcccc ctaccctggg
     3061 caccagatct tccatcaggg ccggagtaaa tccctaagtg cctcaactgc cctctccctg
     3121 gcagccatct tgtcccctct attcctctag ggagcactgt gcccactctt tctgggtttt
     3181 ccaagggaat gggcttgcag gatggagtgt ctgtaaaatc aacaggaaat aaaactgtgt
     3241 atgagcccag gcaaaaaaaa aaaaaaaaaa aaaaa
//