LOCUS BC009106 2959 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens SEC16 homolog B (S. cerevisiae), mRNA (cDNA clone MGC:17455 IMAGE:3448742), complete cds. ACCESSION BC009106 VERSION BC009106.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2959) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2959) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: m Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14916476. FEATURES Location/Qualifiers source 1..2959 /db_xref="H-InvDB:HIT000034169" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17455 IMAGE:3448742" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2959 /gene="SEC16B" /gene_synonym="PGPR-p117" /gene_synonym="RGPR" /gene_synonym="SEC16S" /db_xref="GeneID:89866" /db_xref="HGNC:HGNC:30301" CDS 83..1960 /gene="SEC16B" /gene_synonym="PGPR-p117" /gene_synonym="RGPR" /gene_synonym="SEC16S" /codon_start=1 /product="SEC16B protein" /protein_id="AAH09106.1" /db_xref="GeneID:89866" /db_xref="HGNC:HGNC:30301" /translation="MELWAPQRLPQTRGKATAPSKDPDRGFRRDGHHRPVPHSWHNGE RFHQWQDNRGSPQPQQEPRADHQQQPHYASRPGDWHQPVSGVDYYEGGYRNQLYSRPG YENSYQSYQSPTMREEYAYGSYYYHGHPQWLQEERVPRQRSPYIWHEDYREQKYLDEH HYENQHSPFGTNSETHFQSNSRNPCKDSPASNSGQEWPGELFPGSLLAEAQKNKPSLA SESNLLQQRESGLSSSSYELSQYIRDAPERDDPPASAAWSPVQAEDVSSAGPKAPMKF YIPHVPVSFGPGGQLVRVGPSSPTDGQAALVELHSMEVILNDSEEQEEMRSFSGPLIR EDVHKVDIMTFCQQKAAQSCKSETLGSRDSALLWQLLVLLCRQNGSMVGSDIAELLMQ DCKKLEKYKRQPPVANLINLTDEDWPVLSSGTPNLLTGEIPPSVETPAQIVEKFTRLL YYGRKKEALEWAMKNHLWGHALFLSSKMDPQTYSWVMSGFTSTLALNDPLQTLFQLMS GRIPQAATCCGEKQWGDWRPHLAVILSNQAGDPELYQRAIVAIGDTLAGKGLVEAAHF CYLMAHVPFGHYTVKTDHLVLLGSSHRYATWEKGNSKDIFQGTVLALVGFYGSSFHFL M" BASE COUNT 738 a 736 c 782 g 703 t ORIGIN 1 gtgggaattt ggatgatttc tcatgaagat aaaataactg cacaacttac tcaaaaccca 61 ggacaaattc agagagtcaa ggatggaact ttgggctccc cagaggctgc cccagacacg 121 agggaaggcc acagcaccct caaaggatcc agaccgaggg tttcggagag atggacatca 181 tcggcctgtc cctcactctt ggcacaatgg agagaggttt caccaatggc aagacaaccg 241 tgggagcccc cagccacagc aggagcccag ggcagaccat cagcagcagc cccattatgc 301 atccaggcca ggggactggc atcagcctgt gtctggagtt gactattacg aaggtggtta 361 tcgcaatcag ttgtattcaa ggccaggtta tgagaattca tatcagagct atcagtctcc 421 cacaatgagg gaggaatatg cttatggaag ttattactat catggacacc cacagtggct 481 gcaggaagaa agagtgccaa ggcaacggag tccttatatc tggcacgaag attaccgaga 541 gcaaaagtac cttgatgaac atcattatga aaaccagcac agtccatttg gaacaaatag 601 tgagacccac ttccaatcta acagtaggaa cccttgtaaa gacagccctg cttccaactc 661 tggacaggag tggccggggg agctgtttcc agggagcctg cttgctgagg cccagaaaaa 721 taagccgtca ttggctagtg agtccaacct tctccagcag cgtgagtctg gtctcagctc 781 cagcagctat gagctcagtc agtacatcag agatgccccg gagcgggatg atcccccagc 841 ttcagcagct tggagtccag ttcaggctga agatgtctcc tcagctggtc ccaaagcacc 901 catgaagttc tacatccctc atgttcctgt gagtttcggg ccaggaggtc agctggtgcg 961 tgtaggtccc agctctccca ctgacgggca agcagccctt gttgaattgc acagcatgga 1021 ggttattctt aatgattccg aagagcaaga ggagatgaga agtttctcag gacccttgat 1081 tagggaagat gtacataagg tggatattat gacgttttgc cagcagaaag cagctcagag 1141 ctgcaaatct gagacactgg ggagcagaga ctcagctcta ctgtggcagc tcttggttct 1201 cctttgtcgc cagaatgggt ccatggtggg gtctgacatc gctgagctgc taatgcaaga 1261 ctgcaagaag ctggagaagt acaagcggca gccccctgtg gccaacctca tcaacctgac 1321 cgatgaggac tggccagtgc tgagctctgg gaccccgaac ctgctcacgg gagagatccc 1381 ccccagtgtg gagacacctg cgcagatcgt ggagaaattc actaggctgc tctactatgg 1441 aaggaagaag gaagccttgg agtgggccat gaagaaccac ttgtggggcc atgctttgtt 1501 cctgtccagc aagatggacc cacagaccta cagctgggtc atgagtggct tcaccagcac 1561 gctggcgctc aatgacccac tgcagaccct cttccagctc atgtcgggga ggattccaca 1621 ggcagccacg tgttgtggag aaaagcagtg gggagactgg aggcctcact tggctgtgat 1681 tctgtcgaat caggctgggg acccagagct gtatcagcgt gcgattgttg ccattgggga 1741 caccctggct gggaaggggc ttgtggaggc agctcacttc tgctatctca tggctcacgt 1801 gccctttggc cactacaccg tgaagacaga ccatctggtc ttgctgggca gcagccacag 1861 gtatgcgacc tgggagaaag gaaacagtaa ggacattttc caagggactg ttttagccct 1921 tgttgggttt tatggatcca gttttcattt tctcatgtga atttcagcta ccgccggctc 1981 ccttatttgg gattgttatc tgtgcaggtc tgtgcaagga gatgccccgt gggccccaca 2041 ttacagcatt ggcgggggcc tcaggccaca ggtcctcctc tgcaaagagg tgggctgatg 2101 cctttgtgtg gtattgtgcc ctttggccac tgggtggcac cctggctcca caagctaact 2161 ttgttccttt aaaaaaacaa cattttacat gtggaggctt gtgggtccgt gttaggcagc 2221 cctgggcctg ttctgagagc ctacccaggc aaaactggaa aatggaagaa gtttatgttt 2281 agtccctctt tggggcccta gcatccctac aatgacttgg tgcacaagct acttagagtc 2341 ccactggtga cattctctgt tggccatagc attaggcttt tcctgcagga ggccctcaat 2401 cagctctcag tgaatgaatg catggacaga acgatttgct ccctagaggc cctccctgtt 2461 ctgtatctct ctatccccct ccccatacgt gttaagagtc actaagctct tacgttgtgc 2521 caggcatttt ctttgcacta tttcctttaa ttattacaca tttaccctat gaagaagtga 2581 agtgaagcaa agattttaat cgtcacttat ggaggaggaa aaccaaggca cagggagatg 2641 aaataacttg tctcagatgg tacagtgagg gtgtgggtga gttggactca gaatccaggc 2701 agtcagcctg caaagccctt ttaactgttg caccacactg cctaccactg aggcagtgta 2761 cccagctcat tgcctgttcc ttccaggttc ctggtctctg atagcacatg gctagcttgt 2821 caaagaatcc cttctgtgcc aaatgtacaa taagtgtgta tgggctaata tgtctcccct 2881 cctatgttta cgttggttta tgttgaatga ggaaattctt ggaaataaag tcctaccccc 2941 aggaaaaaaa aaaaaaaaa //