LOCUS BC009077 1132 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens APAF1 interacting protein, mRNA (cDNA clone MGC:9397
IMAGE:3875061), complete cds.
ACCESSION BC009077
VERSION BC009077.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1132)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1132)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: p Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705723.
FEATURES Location/Qualifiers
source 1..1132
/db_xref="H-InvDB:HIT000034165"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9397 IMAGE:3875061"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1132
/gene="APIP"
/gene_synonym="APIP2"
/gene_synonym="CGI-29"
/gene_synonym="dJ179L10.2"
/gene_synonym="MMRP19"
/db_xref="GeneID:51074"
/db_xref="HGNC:HGNC:17581"
CDS 42..770
/gene="APIP"
/gene_synonym="APIP2"
/gene_synonym="CGI-29"
/gene_synonym="dJ179L10.2"
/gene_synonym="MMRP19"
/codon_start=1
/product="APAF1 interacting protein"
/protein_id="AAH09077.1"
/db_xref="GeneID:51074"
/db_xref="HGNC:HGNC:17581"
/translation="MSGCDAREGDCCSRRCGAQDKEHPRYLIPELCKQFYHLGWVTGT
GGGISLKHGDEIYIAPSGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPLFM
NAYTMRGAGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLV
VPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLF
DIAVSMKKVGLDPSQLPVGENGIV"
BASE COUNT 369 a 187 c 248 g 328 t
ORIGIN
1 cgtgcggaga ttggaggccg cgcgggtccc tggtctgggc catgtctggc tgtgatgctc
61 gggagggaga ctgttgttcc cggagatgcg gcgcgcagga caaggagcat ccaagatacc
121 tgatcccaga actttgcaaa cagttttacc atttaggctg ggtcactggg actggaggag
181 gaattagctt gaagcatggc gatgaaatct acattgctcc ttcaggagtg caaaaggaac
241 gaattcagcc tgaagacatg tttgtttgtg atataaatga aaaggacata agtggacctt
301 cgccatcgaa gaagctaaaa aaaagccagt gtactcctct tttcatgaat gcttacacaa
361 tgagaggagc aggtgcagtg attcataccc actctaaagc tgctgtgatg gccacacttc
421 tctttccagg acgggagttt aaaattacac atcaagagat gataaaagga ataaagaaat
481 gtacttccgg agggtattat agatatgatg atatgttagt ggtacccatt attgagaata
541 cacctgagga gaaagacctc aaagatagaa tggctcatgc aatgaatgaa tacccagact
601 cctgtgcagt actggtcaga cgtcatggag tatatgtgtg gggggaaaca tgggagaagg
661 ccaaaaccat gtgtgagtgt tatgactatt tatttgatat tgccgtatca atgaagaaag
721 taggacttga tccttcacag ctcccagttg gagaaaatgg aattgtctaa gccaaaagaa
781 agtctaatta tatacagaga taaagctaaa cgtaattatt atttaaatga aagctatttt
841 tttaaatgaa ttgaaatttt tcatgatgct actaatttgc cactaaatac tgcaaatggt
901 caccctgaat ctcttctgac attggatgtt atttgcttat attcttataa ttttaaatga
961 gggcacagtg aaatgaaaat tttatactct atgtttctgt ttatttttaa atccttaaca
1021 gcaaaatatt tgcctttaat ttctttttta tatatactct cagagaattc ctcttaattt
1081 ttaaagatgc tggtgataat aaaattcatt agaaaataaa aaaaaaaaaa aa
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