LOCUS BC009047 1788 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphodiesterase 9A, mRNA (cDNA clone MGC:9130
IMAGE:3874635), complete cds.
ACCESSION BC009047
VERSION BC009047.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1788)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1788)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48762716.
FEATURES Location/Qualifiers
source 1..1788
/db_xref="H-InvDB:HIT000034153"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9130 IMAGE:3874635"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1788
/gene="PDE9A"
/gene_synonym="HSPDE9A2"
/db_xref="GeneID:5152"
/db_xref="HGNC:HGNC:8795"
/db_xref="MIM:602973"
CDS 38..1639
/gene="PDE9A"
/gene_synonym="HSPDE9A2"
/codon_start=1
/product="phosphodiesterase 9A"
/protein_id="AAH09047.1"
/db_xref="GeneID:5152"
/db_xref="HGNC:HGNC:8795"
/db_xref="MIM:602973"
/translation="MGSGSSSYRPKAIYLDIDGRIQKVIFSKYCNSSDIMDLFCIATG
LPRNTTISLLTTDDAMVSIDPTMPANSERTPYKVRPVAIKQLSEREELIQSVLAQVAE
QFSRAFKINELKAEVANHLAVLEKRVELEGLKVVEIEKCKSDIKKMREELAARSSRTN
CPCKYSFLDNHKKLTPRRDVPTYPKYLLSPETIEALRKPTFDVWLWEPNEMLSCLEHM
YHDLGLVRDFSINPVTLRRWLFCVHDNYRNNPFHNFRHCFCVAQMMYSMVWLCSLQEK
FSQTDILILMTAAICHDLDHPGYNNTYQINARTELAVRYNDISPLENHHCAVAFQILA
EPECNIFSNIPPDGFKQIRQGMITLILATDMARHAEIMDSFKEKMENFDYSNEEHMTL
LKMILIKCCDISNEVRPMEVAEPWVDCLLEEYFMQSDREKSEGLPVAPFMDRDKVTKA
TAQIGFIKFVLIPMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQKKTD
SLTSGATEKSRERSRDVKNSEGDCA"
BASE COUNT 489 a 478 c 467 g 354 t
ORIGIN
1 tacagtaaaa agtccgagtg cagccgccgg gcgcaggatg ggatccggct cctccagcta
61 ccggcccaag gccatctacc tggacatcga tggacgcatt cagaaggtaa tcttcagcaa
121 gtactgcaac tccagcgaca tcatggacct gttctgcatc gccaccggcc tgcctcggaa
181 cacgaccatc tccctgctga ccaccgacga cgccatggtc tccatcgacc ccaccatgcc
241 cgcgaattca gaacgcactc cgtacaaagt gagacctgtg gccatcaagc aactctccga
301 gagagaagaa ttaatccaga gcgtgctggc gcaggttgca gagcagttct caagagcatt
361 caaaatcaat gaactgaaag ctgaagttgc aaatcacttg gctgtcctag agaaacgcgt
421 ggaattggaa ggactaaaag tggtggagat tgagaaatgc aagagtgaca ttaagaagat
481 gagggaggag ctggcggcca gaagcagcag gaccaactgc ccctgtaagt acagtttttt
541 ggataaccac aagaagttga ctcctcgacg cgatgttccc acttacccca agtacctgct
601 ctctccagag accatcgagg ccctgcggaa gccgaccttt gacgtctggc tttgggagcc
661 caatgagatg ctgagctgcc tggagcacat gtaccacgac ctcgggctgg tcagggactt
721 cagcatcaac cctgtcaccc tcaggaggtg gctgttctgc gtccacgaca actacagaaa
781 caaccccttc cacaacttcc ggcactgctt ctgcgtggcc cagatgatgt acagcatggt
841 ctggctctgc agtctccagg agaagttctc acaaacggat atcctgatcc taatgacagc
901 ggccatctgc cacgatctgg accatcccgg ctacaacaac acgtaccaga tcaatgcccg
961 cacagagctg gcggtccgct acaatgacat ctcaccgctg gagaaccacc actgcgccgt
1021 ggccttccag atcctcgccg agcctgagtg caacatcttc tccaacatcc cacctgatgg
1081 gttcaagcag atccgacagg gaatgatcac attaatcttg gccactgaca tggcaagaca
1141 tgcagaaatt atggattctt tcaaagagaa aatggagaat tttgactaca gcaacgagga
1201 gcacatgacc ctgctgaaga tgattttgat aaaatgctgt gatatctcta acgaggtccg
1261 tccaatggaa gtcgcagagc cttgggtgga ctgtttatta gaggaatatt ttatgcagag
1321 cgaccgtgag aagtcagaag gccttcccgt ggccccgttc atggaccgag acaaagtgac
1381 caaggccaca gcccagattg ggttcatcaa gtttgtcctg atcccaatgt ttgaaacagt
1441 gaccaagctc ttccccatgg ttgaggagat catgctgcag ccactttggg aatcccgaga
1501 tcgctacgag gagctgaagc ggatagatga cgccatgaaa gagttacaga agaagactga
1561 cagcttgacg tctggggcca ccgagaagtc cagagagaga agcagagatg tgaaaaacag
1621 tgaaggagac tgtgcctgag gaaagcgggg ggcgtggctg cagttctgga cgggctggcc
1681 gagctgcgcg ggatccttgt gcagggaaga gctgccctgg gcacctggca ccacaagacc
1741 atgttttcta agaaccattt tgttcactga tacaaaaaaa aaaaaaaa
//