LOCUS BC009042 1702 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Fanconi anemia, complementation group L, mRNA (cDNA
clone MGC:8831 IMAGE:3870828), complete cds.
ACCESSION BC009042
VERSION BC009042.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1702)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1702)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49472818.
FEATURES Location/Qualifiers
source 1..1702
/db_xref="H-InvDB:HIT000258929"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8831 IMAGE:3870828"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1702
/gene="FANCL"
/gene_synonym="FLJ10335"
/gene_synonym="POG"
/db_xref="GeneID:55120"
/db_xref="HGNC:HGNC:20748"
/db_xref="MIM:608111"
CDS 38..1165
/gene="FANCL"
/gene_synonym="FLJ10335"
/gene_synonym="POG"
/codon_start=1
/product="Fanconi anemia, complementation group L"
/protein_id="AAH09042.1"
/db_xref="GeneID:55120"
/db_xref="HGNC:HGNC:20748"
/db_xref="MIM:608111"
/translation="MAVTEASLLRQCPLLLPQNRSKTVYEGFISAQGRDFHLRIVLPE
DLQLKNARLLCSWQLRTILSGYHRIVQQRMQHSPDLMSFMMELKMLLEVALKNRQELY
ALPPPPQFYSSLIEEIGTLGWDKLVYADTCFSTIKLKAEDASGREHLITLKLKAKYPA
ESPDYFVDFPVPFCASWTPQSSLISIYSQFLAAIESLKAFWDVMDEIDEKTWVLEPEK
PPRSATARRIALGNNVSINIEVDPRHPTMLPECFFLGADHVVKPLGIKLSRNIHLWDP
ENSVLQNLKDVLEIDFPARAILEKSDFTMDCGICYAYQLDGTIPDQVCDNSQCGQPFH
QICLYEWLRGLLTSRQSFNIIFGECPYCSKPITLKMSGRKH"
BASE COUNT 528 a 296 c 367 g 511 t
ORIGIN
1 gtctagagct tttctgtgtt tctccggact tcgagccatg gcggtgacgg aagcgagcct
61 gttgcgccag tgccccctgc ttctgcccca gaaccggtcg aaaaccgtgt atgagggatt
121 catctcggct cagggaagag acttccacct taggatagtg ttgcctgaag atttacaact
181 gaagaatgca agattattat gtagttggca gctgagaaca atacttagtg gataccatcg
241 aatagtacaa cagagaatgc agcactctcc tgatctaatg agctttatga tggagttgaa
301 gatgcttttg gaagttgcct taaagaatag acaagagctg tatgcactac ctcctcctcc
361 ccagttctac tcaagcctta ttgaagagat aggaactctt ggttgggata aacttgtgta
421 tgcggatacc tgcttcagta ccatcaagtt aaaagcagaa gatgcttctg gtagagagca
481 tttaatcact ctcaagttga aggcaaagta tcctgcagaa tcaccagatt attttgtgga
541 ttttcctgtt ccattttgtg cctcctggac acctcagagc tccttaataa gcatttatag
601 tcagtttttg gcagcaatag aatcactaaa ggcattctgg gatgttatgg atgaaatcga
661 tgagaagacc tgggtacttg agccagaaaa acctccacgg agtgcaacag cacgcagaat
721 tgcattaggt aataatgttt ccataaatat agaggtagac cccaggcatc ctactatgct
781 tcctgagtgc ttctttcttg gagctgacca tgtggtaaaa cccctgggaa ttaagctgag
841 caggaacata catttgtggg atccagaaaa tagtgtgtta caaaatttga aagatgtttt
901 agaaattgat tttccagctc gtgctatcct ggaaaaatct gattttacta tggattgtgg
961 aatttgttat gcttatcaac ttgacggtac cattcctgat caagtgtgtg ataattccca
1021 gtgtggacaa cctttccatc aaatatgctt atatgagtgg ctgagaggac tactaactag
1081 tagacagagt tttaacatca tatttggtga atgtccatat tgtagtaagc caattacctt
1141 aaaaatgtct ggaaggaaac actgaaataa gaatacaaca tttcggtgaa gagctggaaa
1201 cttaaaaaat tatcaaaagg aattttggta tcatcttcag agaaaaaata aagcaagaaa
1261 tactaacatc aaaaggacag gtatgatgat gcgataataa taaacatctg cgtttgtctc
1321 ttcactaaga gtaaactggg aaattgtagg ccaaagtcca gttgaacttt ctaagtctgt
1381 gatccccgtg ctgactgtgg aagtgtattt ataccaagat ggagatcttg acttcttgaa
1441 tatatctgga ctggtaaaat cttgatgagg ctcataaaat gagtttggga attgtgtata
1501 gctgattttt tgtgggaaac tgtttacttc attcaaaggt tcttgagact cttgatattt
1561 ctgtcttctc cttgtgcttt cctatggaaa aaatacatat atagtttagt ttgttagacg
1621 tgagttatcc aagtatttat tttgtgtagt gtgtaagaat gctaaataaa atgttataca
1681 agaaaaaaaa aaaaaaaaaa aa
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