LOCUS BC009041 1417 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 71, mRNA (cDNA clone
MGC:9894 IMAGE:3868744), complete cds.
ACCESSION BC009041
VERSION BC009041.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1417)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1417)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: i Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9506646.
FEATURES Location/Qualifiers
source 1..1417
/db_xref="H-InvDB:HIT000034151"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9894 IMAGE:3868744"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1417
/gene="C11orf71"
/gene_synonym="FLJ20010"
/db_xref="GeneID:54494"
/db_xref="HGNC:HGNC:25937"
CDS 149..520
/gene="C11orf71"
/gene_synonym="FLJ20010"
/codon_start=1
/product="chromosome 11 open reading frame 71"
/protein_id="AAH09041.1"
/db_xref="GeneID:54494"
/db_xref="HGNC:HGNC:25937"
/translation="MALNNVSLSSGDQRSRVAYRSSHGDLRPRASALAMVSGDGFLVS
RPEAIHLGPRQAVRPSVRAESRRVDGGGRSPREPDGRGRSRQARFSPYPIPAVEPDLL
RSVLQQRLIALGGVIAARISV"
BASE COUNT 363 a 326 c 319 g 409 t
ORIGIN
1 ggcggcttct ggctcttccg caggctcagt tatgggttcc tgtgtgctta gtcatcgggt
61 ccgacacagg ctggactgat ctggggagcc gcgaagggcc tgccttcaca aagggacgta
121 acgcaagtac tgcgggcagt gtttgaatat ggccctgaac aatgtgtccc tgtcctccgg
181 tgatcagagg agcagggtgg cctaccgctc ttcccatggc gacctcagac cgcgggcgtc
241 agcgttggcg atggtctccg gagacggctt cctcgtttcc aggcctgaag cgattcatct
301 aggacctcgg caggcggtgc gaccaagcgt tcgggccgag agccgtcgag tggatggtgg
361 cggccggagc ccaagggaac cagatggccg gggccggagc cgccaagcca gattctcacc
421 ttacccaatc cctgccgttg aacccgatct cctaagaagt gtgctgcaac agcgtttgat
481 tgcattagga ggtgttatcg cagctcgaat ttcagtttaa acgaacacct ttcctctggc
541 cctcacttag cttgtgaaca ggccttttta aaatcctttc ttggtgtagc agcaatcgtg
601 ttgttttatt tttagatgga tgtattttca tttaatacgt gggagttata tgaatatgtc
661 ctagcactaa gggaagtgta acagttgatt gatttaggtg gttttatgca gccagaacga
721 ttggatcagg aaaggtgtgg aagggatatt cttaggtcgt cacaaagctg agctgatggg
781 agcaccctcc ccagaggtca acaatccatt cgttaactca gacacttaac ctttaccttt
841 acttctgttg gcgaaaaaga agtgctcctt tttattacac tgatttatcc ttccatcttt
901 tccttggcat ttaccatctt ccatctcccc cttcactttt ttcagatatg tctacaaaca
961 gactccaatc tcagtcgcac taaaaataag aacaaaacct aaaccttaca gttctttcaa
1021 attattaaat caatttatta ttcctttctt tggcaaaggt tccaaatttt tactttatat
1081 ttgtaatttt actatttgca ttcagtccca gcgcattaat ctgaatctgc tgtcctaaaa
1141 tacactggtg aaaacattac ttgtacaatc tcctatcaga aaactgttca tctactcact
1201 gtagtgccct ccttgaaatg tgtgtttgtt cattcaacta acaatatttg gggatccctg
1261 tagtaaacac tgtatgaatt ttacacagtc tggccatcaa gaaagatcac ggagtatatt
1321 ctagatgggg aggctactaa gtgaatagga atcaccacgc tgggctgttt attaggtaca
1381 gtaataaaca taagtactgg taaaaaaaaa aaaaaaa
//