LOCUS BC009025 1237 bp mRNA linear HUM 06-JUN-2005 DEFINITION Homo sapiens chromosome 17 open reading frame 42, mRNA (cDNA clone IMAGE:4184795), partial cds. ACCESSION BC009025 VERSION BC009025.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1237) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1237) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC009025.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: l Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13375953. FEATURES Location/Qualifiers source 1..1237 /db_xref="H-InvDB:HIT000034144" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4184795" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1237 /gene="C17orf42" /gene_synonym="FLJ22729" /db_xref="GeneID:79736" CDS <1..1053 /gene="C17orf42" /gene_synonym="FLJ22729" /codon_start=1 /product="C17orf42 protein" /protein_id="AAH09025.2" /db_xref="GeneID:79736" /translation="ERWRCFLTPSRSSLYWALHNFCCRKKSTTPKKITPNVTFCDENA KEPENALDKLFSSEQQASILHVLNTASTKELEAFRLLRGRRSINIVEHRENFGPFQNL ESLMNVPLFKYKSTVQVCNSILCPKTGREKRKSPENRFLRKLLKPDIERERLKAVNSI ISIVFGTRRIAWAHLDRKLTVLDWQQSDRWSLMRGIYSSSVYLEEISSIISKMPKADF YVLKKTGLSIQNSSLFPILLHFHIMEAMLYALLNKTFAQDGQHQVLSMNRNAVGKHFE LMIGDSRTSGKELVKQFLFDSILKADPRVFFPSDKIVHYRQMFLSTELQRVEELYDSL LQAIAFYELAVFDSQP" BASE COUNT 398 a 232 c 247 g 360 t ORIGIN 1 gagaggtgga gatgctttct gaccccgtcg aggtcatccc tgtactgggc cttacataat 61 ttctgctgtc ggaaaaaatc cactacacct aagaaaatta ctcccaatgt tactttttgt 121 gatgaaaatg caaaggagcc cgaaaatgca cttgacaagc tcttctcttc agaacagcag 181 gcttccatct tgcatgtgtt gaatacagca tctactaaag aacttgaagc tttccgattg 241 cttcgtggaa gaaggtccat caatatcgta gagcacagag aaaactttgg gccatttcag 301 aatttagaga gtttaatgaa tgtgcccttg tttaagtata aaagtacagt tcaagtttgt 361 aactccatac tttgtccaaa gactggacgg gaaaaaagaa agtcaccgga aaaccggttc 421 ctgagaaagc tcctcaaacc agacatagaa agagaaagac ttaaggcagt taatagtatc 481 atatctatcg tttttggtac tcgaagaatt gcctgggctc accttgatcg taagttgaca 541 gtgctggact ggcagcaaag tgaccgttgg agtttaatga gaggaatata ctcatcatca 601 gtctatttag aagagatttc ctcgatcatt tcaaagatgc ctaaagcaga tttctatgtt 661 ctgaaaaaaa caggactttc cattcagaac tcatctctgt ttccaatact gttacatttt 721 catatcatgg aagccatgct gtatgcctta ttaaataaaa cttttgccca ggatgggcag 781 catcaggtgc tgagcatgaa tcgaaatgca gtggggaagc attttgaact gatgattggt 841 gactcccgga ctagtggaaa agagctagtg aagcagtttc tcttcgattc tatactgaag 901 gcggatcctc gggtgttctt cccatcagat aaaatagttc actacagaca gatgttttta 961 tctactgaac tacaaagagt agaagagctt tatgattcat tattacaagc tattgccttc 1021 tatgaattag cagtgtttga ctctcagcct tagaattctg aggttaacgt gctaaagtat 1081 aattattagc tctaacgtaa caccaactgt tgtgaacatc catgttattg gaaaagaaca 1141 cattttcagt gtattttaga tgtttaaatt ctgacttttg gctattaaat ggtttacaca 1201 ataagccaag accaaatcaa aaaaaaaaaa aaaaaaa //