LOCUS BC009016 1147 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens complement component 1, q subcomponent, C chain, mRNA
(cDNA clone MGC:17279 IMAGE:4212772), complete cds.
ACCESSION BC009016
VERSION BC009016.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1147)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1147)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: m Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56786154.
FEATURES Location/Qualifiers
source 1..1147
/db_xref="H-InvDB:HIT000034142"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17279 IMAGE:4212772"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1147
/gene="C1QC"
/gene_synonym="C1q-C"
/db_xref="GeneID:714"
/db_xref="HGNC:HGNC:1245"
/db_xref="MIM:120575"
CDS 69..806
/gene="C1QC"
/gene_synonym="C1q-C"
/codon_start=1
/product="C1QC protein"
/protein_id="AAH09016.1"
/db_xref="GeneID:714"
/db_xref="HGNC:HGNC:1245"
/db_xref="MIM:120575"
/translation="MDVGPSSLPHLGLKLLLLLLLLPLRGQANTGCYGIPGMPGLPGA
PGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPM
GIPGEPGEEGRYKQKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTC
KVPGLYYFVYHASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVW
LAVNDYYDMVGIQGSDSVFSGFLLFPD"
BASE COUNT 256 a 362 c 306 g 223 t
ORIGIN
1 ggggaagcag atctgaggac atctctgtgc caggccagaa accgcccacc tgcagttcct
61 tctccgggat ggacgtgggg cccagctccc tgccccacct tgggctgaag ctgctgctgc
121 tcctgctgct gctgcccctc aggggccaag ccaacacagg ctgctacggg atcccaggga
181 tgcccggcct gcctggggca ccagggaagg atgggtacga cggactgccg gggcccaagg
241 gggagccagg aatcccagcc attcccggga tccgaggacc caaagggcag aagggagaac
301 ccggcttacc cggccatcct gggaaaaatg gccccatggg accccctggg atgccagggg
361 tgcccggccc catgggcatc cctggagagc caggtgagga gggcagatac aagcagaaat
421 tccagtcagt gttcacggtc actcggcaga cccaccagcc ccctgcaccc aacagcctga
481 tcagattcaa cgcggtcctc accaacccgc agggagatta tgacacgagc actggcaagt
541 tcacctgcaa agtccccggc ctctactact ttgtctacca cgcgtcgcat acagccaacc
601 tgtgcgtgct gctgtaccgc agcggcgtca aagtggtcac cttctgtggc cacacgtcca
661 aaaccaatca ggtcaactcg ggcggtgtgc tgctgaggtt gcaggtgggc gaggaggtgt
721 ggctggctgt caatgactac tacgacatgg tgggcatcca gggctctgac agcgtcttct
781 ccggcttcct gctcttcccc gactagggcg ggcagatgcg ctcgagaccc acgggccttc
841 cacctccctc agcttcctgc atggacccac cttactggcc agtctgcatc cttgcctaga
901 ccattctccc ctccagggag cccaccctga cccaccccca ctgcaccccc tccccatggg
961 ttctctcctt cctctgaact tctttaggag tcactgcttg tgtggttcct gggacactta
1021 accaatgcct tctggtactg ccattctttt tttttttttt tcaagtattg gaaggggtgg
1081 ggagatatat aaataaatca tgaaatcaat acataaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaa
//