LOCUS BC009012 1706 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphoribosyl pyrophosphate synthetase-associated
protein 1, mRNA (cDNA clone MGC:17110 IMAGE:4186365), complete cds.
ACCESSION BC009012
VERSION BC009012.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1706)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1706)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: m Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506130.
FEATURES Location/Qualifiers
source 1..1706
/db_xref="H-InvDB:HIT000034139"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17110 IMAGE:4186365"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1706
/gene="PRPSAP1"
/gene_synonym="PAP39"
/db_xref="GeneID:5635"
/db_xref="HGNC:HGNC:9466"
/db_xref="MIM:601249"
CDS 13..1083
/gene="PRPSAP1"
/gene_synonym="PAP39"
/codon_start=1
/product="phosphoribosyl pyrophosphate
synthetase-associated protein 1"
/protein_id="AAH09012.1"
/db_xref="GeneID:5635"
/db_xref="HGNC:HGNC:9466"
/db_xref="MIM:601249"
/translation="MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETN
GETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYS
KQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQY
IQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPM
VKNATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERG
AYKIYVMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTVDISLILSE
AIRRIHNGESMAYLFRNITVDD"
BASE COUNT 474 a 377 c 418 g 437 t
ORIGIN
1 cccccgccgg ccatgaacgc cgctcgcacc ggctaccgag tcttctcggc caactccacg
61 gccgcctgca cggagctggc caagcgcatc acagagcgcc ttggtgctga attggggaag
121 tctgttgtat atcaagagac caatggagaa acaagagttg aaataaaaga atctgttcgt
181 ggccaagata ttttcattat acagacaata cccagagatg tgaatacagc tgtgatggag
241 ttgctcatca tggcttacgc actgaagact gcctgtgcca ggaacattat tggggtcatc
301 ccctacttcc cctacagcaa gcagagcaag atgaggaaga ggggttccat tgtgtgcaag
361 ctgctagcat ccatgctggc gaaagcaggt ttaactcaca ttatcactat ggatcttcat
421 caaaaggaaa tacaaggctt tttcagcttt cctgtggaca accttagagc ctcacctttc
481 ctgcttcagt atatccagga agaaattcca aattacagaa atgcagtcat tgtagctaag
541 tctcctgatg ctgcaaagag ggcccagtcc tatgcggaga gactgcgtct gggtttggcc
601 gtcattcacg gggaagctca gtgcacggaa ctggacatgg acgatggtcg tcactccccg
661 cctatggtca aaaatgctac tgtgcaccca ggcctggagt tgccattgat gatggccaaa
721 gagaagccac cgataactgt agttggagat gttggaggcc gcatcgcaat catcgtggat
781 gacattattg acgatgtgga gagttttgtt gctgccgcgg agatcctgaa agagagaggc
841 gcctataaga tctatgttat ggccacccac ggcatcctgt ctgcagaggc ccctcgcctg
901 attgaggagt cctccgtaga cgaggtggtg gtgacgaata ctgtccctca tgaggttcag
961 aagctgcagt gtcccaagat aaagactgtg gatatcagtt tgattctttc tgaagccatt
1021 cggagaatcc acaatggaga gtccatggcc taccttttcc gaaacatcac tgtggatgac
1081 tagctttcac gagggtctcg accctggacc tcctgaggga aacatggaaa aagcagtgcc
1141 atgagtgata cagtgtttcc ttgcaaggga ggactcgaaa cagcctggag ttagatatct
1201 tcttttgccc ggattgatgg ggaggaggga ttaaaagagt caggaagaag acagagctaa
1261 tggataaata tcataacatg gccttacatg tctgctgtca tcagccctgt tccttaaaag
1321 ttctagctgc tttcttaaaa ataatctgaa aatcttattg atactaaaga ggagttaaag
1381 gcacataaag tcttaactct ataatgttca tttagttgtt tcagctccag ggaaatggag
1441 gtattgatgt tgaacctggt tagggaagct gagcgcctgt ggccctatta ctatccagtt
1501 ggcctctccc aaatcaactt caagtctttt atagagaatc gtatttttct ttcagaaatt
1561 gttatgccta cagccattga aaaatgaagc attcatgttg ttacatcttc caaggatgtc
1621 agattagaaa atagcatccc acctctgggt atctgagtgg ctctgaagtt gcaaataaaa
1681 taatttgttg tcaaaaaaaa aaaaaa
//