LOCUS BC009010 1126 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens chromosome 6 open reading frame 142, mRNA (cDNA clone
MGC:18257 IMAGE:4158300), complete cds.
ACCESSION BC009010
VERSION BC009010.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1126)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1126)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: g Column: 5.
FEATURES Location/Qualifiers
source 1..1126
/db_xref="H-InvDB:HIT000034137"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18257 IMAGE:4158300"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1126
/gene="C6orf142"
/gene_synonym="MGC18257"
/db_xref="GeneID:90523"
CDS 47..751
/gene="C6orf142"
/gene_synonym="MGC18257"
/codon_start=1
/product="C6orf142 protein"
/protein_id="AAH09010.1"
/db_xref="GeneID:90523"
/translation="MCSWYLGFECSSKSNDYLTLNAGSQQERDQAKLTCPSEVSGTIL
QEREFEANKLQGMQQSDLFKAEYVLIVDSEGEDEAASRKVEQGPPGGIGTAAIRPKSL
AISSSLVSDVVRPKTQGTDLKTSSHPEMLHGMAPQQKHGQTPTTLPRAAGRETKYANL
SSPTSTVSESQLTKPGVIRPVPVKSRILLKKEEEVYEPTPFSKYLEDNSDLFSEQLSH
PMVAIPEHEALDSKEQ"
BASE COUNT 373 a 247 c 234 g 272 t
ORIGIN
1 actgctttct tgacatctgc tagtttgaca cgtggcaccg gattccatgt gcagctggta
61 ccttggattt gaatgttctt ctaaatccaa tgactacttg accttgaatg ctgggagcca
121 acaagagaga gaccaagcga aattgacttg tccttcagag gtcagtggaa cgattttaca
181 agaaagggaa ttcgaagcaa acaaacttca agggatgcag caaagtgacc tcttcaaagc
241 tgaatatgtc cttattgtgg actccgaagg ggaagatgag gctgcaagca gaaaagttga
301 acaaggcccc ccagggggga ttggcaccgc agctatccgg cccaagtctc tagctatctc
361 gtccagtctg gtctctgatg tagtgcgtcc caaaacacag gggactgatc tcaagacctc
421 atcacatcct gaaatgcttc atgggatggc ccctcagcaa aagcatgggc agactcctac
481 aactcttcca agagcagctg gtcgagaaac caaatatgca aatctctcct caccaacttc
541 tacagtatct gagagtcagc tgactaagcc tggagtaatt cgcccagtac ctgtaaaatc
601 cagaatatta ctgaaaaaag aggaggaagt ctatgaaccc acccctttca gtaaatactt
661 ggaagataac agcgacctct tttctgaaca gctgagtcat ccaatggtgg ctattcctga
721 acatgaagct cttgattcca aagagcaatg aagttggagc agaggctgaa aacacaggct
781 gctgaagttt tttggaatgc tggtgctaac cacttgctag atttaacttt tttttttttt
841 ccagaatgag tgctcccttt atgagctgca gtgcagcaga accaaaaaaa aagtttgctg
901 caattatata gcatcacagt gctctgctaa cagccagcat agaagagatt tacctacagc
961 tttttgcacc actgttctag cctttaatgc cttctactta atattaagct gaccgcaata
1021 ctaacgtgcc cctatatttg gcagccaaat aaagaagaat cgtgggtaaa tagaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//