LOCUS BC008982 1625 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens complement component 5a receptor 1, mRNA (cDNA clone
MGC:17119 IMAGE:4177114), complete cds.
ACCESSION BC008982
VERSION BC008982.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: g Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50962746.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000034123"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17119 IMAGE:4177114"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1625
/gene="C5AR1"
/gene_synonym="C5A"
/gene_synonym="C5AR"
/gene_synonym="CD88"
/db_xref="GeneID:728"
/db_xref="HGNC:HGNC:1338"
/db_xref="MIM:113995"
CDS 78..1130
/gene="C5AR1"
/gene_synonym="C5A"
/gene_synonym="C5AR"
/gene_synonym="CD88"
/codon_start=1
/product="complement component 5a receptor 1"
/protein_id="AAH08982.1"
/db_xref="GeneID:728"
/db_xref="HGNC:HGNC:1338"
/db_xref="MIM:113995"
/translation="MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIF
AVVFLVGVLGNALVVWVTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHW
PFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVA
WGLALLLTIPSFLYRVVREEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTL
TICYTFILLRTWSRRATRSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLEPSSPTFL
LLNKLDSLCVSFAYINCCINPIIYVVAGQGFQGRLRKSLPSLLRNVLTEESVVRESKS
FTRSTVDTMAQKTQAV"
BASE COUNT 336 a 493 c 390 g 406 t
ORIGIN
1 cttcccttgg ggctttaaaa accacagccc ttgggcagga gggaccttcg atcctcggga
61 gcccaggaga ccagaacatg aactccttca attataccac ccctgattat gggcactatg
121 atgacaagga taccctggac ctcaacaccc ctgtggataa aacttctaac acgctgcgtg
181 ttccagacat cctggccttg gtcatctttg cagtcgtctt cctggtggga gtgctgggca
241 atgccctggt ggtctgggtg acggcattcg aggccaagcg gaccatcaat gccatctggt
301 tcctcaactt ggcggtagcc gacttcctct cctgcctggc gctgcccatc ttgttcacgt
361 ccattgtaca gcatcaccac tggccctttg gcggggccgc ctgcagcatc ctgccctccc
421 tcatcctgct caacatgtac gccagcatcc tgctcctggc caccatcagc gccgaccgct
481 ttctgctggt gtttaaaccc atctggtgcc agaacttccg aggggccggc ttggcctgga
541 tcgcctgtgc cgtggcttgg ggtttagccc tgctgctgac cataccctcc ttcctgtacc
601 gggtggtccg ggaggagtac tttccaccaa aggtgttgtg tggcgtggac tacagccacg
661 acaaacggcg ggagcgagcc gtggccatcg tccggctggt cctgggcttc ctgtggcctc
721 tactcacgct cacgatttgt tacactttca tcctgctccg gacgtggagc cgcagggcca
781 cgcggtccac caagacactc aaggtggtgg tggcagtggt ggccagtttc tttatcttct
841 ggttgcccta ccaggtgacg gggataatga tgtccttcct ggagccatcg tcacccacct
901 tcctgctgct gaataagctg gactccctgt gtgtctcctt tgcctacatc aactgctgca
961 tcaaccccat catctacgtg gtggccggcc agggcttcca gggccgactg cggaaatccc
1021 tccccagcct cctccggaac gtgttgactg aagagtccgt ggttagggag agcaagtcat
1081 tcacgcgctc cacagtggac actatggccc agaagaccca ggcagtgtag gcgacagcct
1141 catgggccac tgtggcccga tgtccccttc cttcccggcc attctccctc ttgttttcac
1201 ttcacttttc gtgggatggt gttaccttag ctaactaact ctcctccatg ttgcctgtct
1261 ttcccagact tgtccctcct tttccagcgg gactcttctc atccttcctc atttgcaagg
1321 tgaacacttc cttctaggga gcaccctccc accccccacc cccccccaca caccatcttt
1381 ccatcccagg cttttgaaaa acaaacagaa acccgtgtat ctgggatatt tccatatggc
1441 aataggtgtg aacagggaac tcagaataca gacaagtaga aagattctcg cttaaaaaaa
1501 tgtatttatt ttatggcaag ttggaaaata tgtaactgga atctcaaaag ttctttggga
1561 caaaacagaa gtccatggag ttatctaagc tcttgtaagt gagttaattt aaaaaaaaaa
1621 aaaaa
//