LOCUS BC008975 1210 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens PCI domain containing 2, mRNA (cDNA clone
IMAGE:4215274), complete cds.
ACCESSION BC008975
VERSION BC008975.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: o Column: 6
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1210
/db_xref="H-InvDB:HIT000034119"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4215274"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1210
/gene="PCID2"
/gene_synonym="F10"
/gene_synonym="RP11-98F14.6"
/db_xref="GeneID:55795"
/db_xref="HGNC:HGNC:25653"
CDS 423..650
/gene="PCID2"
/gene_synonym="F10"
/gene_synonym="RP11-98F14.6"
/codon_start=1
/product="PCID2 protein"
/protein_id="AAH08975.1"
/db_xref="GeneID:55795"
/db_xref="HGNC:HGNC:25653"
/translation="MVIVSRCGTGGSVTEHANEVVMKLEALQRPGGLPLSILLVLAGL
TKRGASDLRHPIAEDRQSLSCATVQPSLQDV"
BASE COUNT 317 a 271 c 288 g 334 t
ORIGIN
1 cggggatcag gttttaacat gaggcttgat gtggccaaaa aaccacatcc aaaccatagc
61 agtagcccag cttctctttt cactcattgt gtttgttgcc aataaactct gtagcctcaa
121 aagatgggaa cttttccttt tgggtgttgt ggatcccatc catgaaaccg aaagtaagtg
181 ttgagcagag caagctgtat gtaaaggcca aggaatgaag aagcaggagt gtggctcaca
241 aatcaacttc tctactcctg aggggtgagg ggattgaaat agagggtttc ttgaatgaag
301 gggttggaca ttgaaagcaa ggggaagaat attcatggct tttctggaaa tggacggtga
361 acttctggga gctgaagcac tgccatcttt ttgtcctttt acggcgtctt cccgtcattg
421 tcatggtgat tgtcagccgc tgtggcactg gtgggagtgt cacggagcat gcaaatgagg
481 ttgtaatgaa gttggaggcc ctgcaaaggc caggtggact tccacttagc atcctgctgg
541 tcttagctgg tttaaccaag aggggagcct ctgacctcag gcatcctatt gctgaagata
601 ggcagagttt gagttgtgca actgttcagc caagcctaca agatgtatag tgctgtgggg
661 gtaacatggc ctccctaccc agcctcgctt cagaactttc gtaccaaggc tggactgtag
721 aaaagtcctt cctatgccat ggcactttcc cactgaggcc tcccatgggt gccgtttcct
781 ttgctggaag gttctcctcg actcctggca gtctatactc atttaaaggt ttccgccttc
841 tctaaagcct ctcactgctg gacttcacgg tggatcagat ttccctttta taaacattca
901 tagcagactg tacatttctt tcactgcgtt taccaaacga tttgatggcg aagtgcgtca
961 gggcgtgggc cttctccatc actagcgttc cttgcacccc aggagctcaa tccgtgtttc
1021 ctaaatgaat acttgacatt tcgcttgatc gtatattttt gcacagcagt gatcttcacg
1081 acctttgatt aggcagtggc ttctcagata cgacaacaaa agcataagca accaaaggaa
1141 aaaattaatt ggacttcatc aaaattaaaa actttagact tcaaaggaca ttctcaaaaa
1201 aaaaaaaaaa
//