LOCUS BC008972 1118 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens centromere protein N, mRNA (cDNA clone MGC:9498
IMAGE:3048151), complete cds.
ACCESSION BC008972
VERSION BC008972.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1118)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1118)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725678.
FEATURES Location/Qualifiers
source 1..1118
/db_xref="H-InvDB:HIT000034117"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9498 IMAGE:3048151"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1118
/gene="CENPN"
/gene_synonym="BM039"
/gene_synonym="CENP-N"
/gene_synonym="FLJ13607"
/gene_synonym="FLJ22660"
/db_xref="GeneID:55839"
/db_xref="HGNC:HGNC:30873"
CDS 84..1103
/gene="CENPN"
/gene_synonym="BM039"
/gene_synonym="CENP-N"
/gene_synonym="FLJ13607"
/gene_synonym="FLJ22660"
/codon_start=1
/product="CENPN protein"
/protein_id="AAH08972.1"
/db_xref="GeneID:55839"
/db_xref="HGNC:HGNC:30873"
/translation="MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQR
KESVVQHLIHLCEEKRASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMK
QFKNSFKKILQRALKNVTVSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPY
AFTSSSMLRRNTPLLGQALTIASKHHQIVKMDLRSRYLDSLKAIVFKQYNQTFETHNS
TTPLQERSLGLDINMDSRIIHENIVEKERVQRITQETFGDYPQPQLEFAQYKLETKFK
SGLNGSILAEREEPLRCLIKFSSPHLLEALKSLAPAGIADAPLSPLLTCIPNKRMNYF
KIRDK"
BASE COUNT 376 a 226 c 242 g 274 t
ORIGIN
1 gcaattggtg gctttgaagg cgcggcgagc gggaacagct cttgaggagt gagactgcag
61 gagatgtggg ccgtgccaaa gagatggatg agactgttgc tgagttcatc aagaggacca
121 tcttgaaaat ccccatgaat gaactgacaa caatcctgaa ggcctgggat tttttgtctg
181 aaaatcaact gcagactgta aatttccgac agagaaagga atctgtagtt cagcacttga
241 tccatctgtg tgaggaaaag cgtgcaagta tcagtgatgc tgccctgtta gacatcattt
301 atatgcaatt tcatcagcac cagaaagttt gggatgtttt tcagatgagt aaaggaccag
361 gtgaagatgt tgaccttttt gatatgaaac aatttaaaaa ttcgttcaag aaaattcttc
421 agagagcatt aaaaaatgtg acagtcagct tcagagaaac tgaggagaat gcagtctgga
481 ttcgaattgc ctggggaaca cagtacacaa agccaaacca gtacaaacct acctacgtgg
541 tgtactactc ccagactccg tacgccttca cgtcctcctc catgctgagg cgcaatacac
601 cgcttctggg tcaggcgctg acaattgcta gcaaacacca tcagattgtg aaaatggacc
661 tgagaagtcg gtatctggac tctcttaagg ctattgtttt taaacagtat aatcagacct
721 ttgaaactca caactctacg acacctctac aggaaagaag ccttggacta gatataaata
781 tggattcaag gatcattcat gaaaacatag tagaaaaaga gagagtccaa cgaataactc
841 aagaaacatt tggagattat cctcaaccac aactagaatt tgcacaatat aagcttgaaa
901 cgaaattcaa aagtggttta aatgggagca tcttggctga gagggaagaa cccctccgat
961 gcctaataaa gttctctagc ccacatcttc tggaagcatt gaaatcctta gcaccagcgg
1021 gtattgcaga tgctccactt tctccactgc tcacttgcat acccaacaag agaatgaatt
1081 attttaaaat tagagataaa taaaaaaaaa aaaaaaaa
//