LOCUS BC008965 2793 bp mRNA linear HUM 12-NOV-2003 DEFINITION Homo sapiens bromodomain adjacent to zinc finger domain, 2A, mRNA (cDNA clone IMAGE:2959181), partial cds. ACCESSION BC008965 VERSION BC008965.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2793) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2793) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC008965.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: a Column: 3. FEATURES Location/Qualifiers source 1..2793 /db_xref="H-InvDB:HIT000087179" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2959181" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2793 /gene="BAZ2A" /gene_synonym="KIAA0314" /gene_synonym="TIP5" /db_xref="GeneID:11176" /db_xref="MIM:605682" CDS <1..2514 /gene="BAZ2A" /gene_synonym="KIAA0314" /gene_synonym="TIP5" /codon_start=1 /product="BAZ2A protein" /protein_id="AAH08965.2" /db_xref="GeneID:11176" /db_xref="MIM:605682" /translation="VPGRRGRRDGEVDATASSIPELERQIEKLSKRQLFFRKKLLHSS QMLRAVSLGQDRYRRRYWVLPYLAGIFVEGTEGNLVPEEVIKKETDSLKVAAHASLNP ALFSMKMELAGSNTTASSPARARGRPRKTKPGSMQPRHLKSPVRGQDSEQPQAQLQPE AQLHAPAQPQPQLQLQLQSHKGFLEQEGSPLSLGQSQHDLSQSAFLSWLSQTQSHSSL LSSSVLTPDSSPGKLDPAPSQPPEEPEPDEAESSPDPQALWFNISAQMPCNAAPTPPP AVSEDQPTPSPQQLASSKPMNRPSAANPCSPVQFSSTPLAGLAPKRRAGDPGEMPQSP TGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVPPGWWWIRDPEMLDAMLKALHPRGI REKALHKHLNKHRDFLQEVCLRPSADPIFEPRQLPAFQEGIMSWSPKEKTYETDLAVL QWVEELEQRVIMSDLQIRGWTCPSPDSTREDLAYCEHLSDSQEDITWRGRGREGLAPQ RKTTNPLDLAVMRLAALEQNVERRYLREPLWPTHEVVLEKALLSTPNGAPEGTTTEIS YEITPRIRVWRQTLERCRSAAQVCLCLGQLERSIAWEKSVNKVTCLVCRKGDNDEFLL LCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQKPGFPKRGQKRKSGYS LNFSEGDGRRRRVLLRGRESPAAGPRYSEEGLSPSKRRRLSMRNHHSDLTFCEIILME MESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVF DNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQANL" misc_feature 817..1107 /gene="BAZ2A" /gene_synonym="KIAA0314" /gene_synonym="TIP5" /note="CD2; Region: T-cell surface antigen CD2 protein. This family consists of several mammalian T-cell surface antigen CD2 proteins as well as homologous African swine fever virus sequences. CD2 mediates T cell adhesion via its ectodomain and signal transduction utilising its 117-amino acid cytoplasmic tail. The structural and functional similarities of the African swine fever virus (ASFV) LMW8-DR to CD2, a protein that is involved in cell-cell adhesion and immune response modulation, suggest a possible role in the pathogenesis of ASFV infection" /db_xref="CDD:pfam05790" misc_feature 1831..1965 /gene="BAZ2A" /gene_synonym="KIAA0314" /gene_synonym="TIP5" /note="PHD; Region: PHD-finger. PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains" /db_xref="CDD:pfam00628" misc_feature 2194..2493 /gene="BAZ2A" /gene_synonym="KIAA0314" /gene_synonym="TIP5" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" BASE COUNT 657 a 810 c 745 g 581 t ORIGIN 1 gtccctggcc gcaggggtcg aagagatgga gaggttgatg ccacagcatc tagcatccca 61 gagctagagc gccagataga aaaactcagc aagcgtcagc ttttctttcg caaaaagctg 121 cttcactcat cccagatgct tcgggcggtc tccctgggtc aggaccgcta cagacgtcgc 181 tactgggtat tgccgtattt ggctggtatc tttgtagaag gaacagaggg gaacttagtt 241 cctgaggagg tgataaagaa ggaaactgac tccttaaaag tggcagccca tgcgtcactc 301 aaccctgccc tcttctctat gaagatggag ttagctggct ccaacaccac tgccagttct 361 cctgcccggg cccgaggccg acctcgaaaa actaagcccg ggtctatgca acctaggcat 421 cttaagtccc ctgtcagggg tcaggattca gaacagcccc aggcccagct tcagcctgag 481 gctcagcttc atgctcctgc ccagccccag cctcagcttc agcttcagct tcagtcccat 541 aaggggttcc tggagcaaga aggctccccc ttgtcactgg gtcagagcca gcatgacctc 601 agccagtcag ccttcctgtc ttggctgagc cagactcaga gccatagctc cctgttgagc 661 agctcagtcc tcacacctga tagcagtccg ggaaaactag acccagctcc atcacaaccc 721 ccggaggagc cagagcctga tgaggcagaa tccagccctg atcctcaagc actctggttt 781 aacatctcag cccagatgcc ctgcaatgct gcccccacac cgccccctgc agtttctgag 841 gaccaaccca ctccctcccc tcagcagctt gcctcctcca agccaatgaa tagacctagt 901 gctgccaacc cttgttctcc agtgcagttc tcttccacgc ccttggctgg gttggcccct 961 aagaggcgag caggagaccc tggagaaatg ccacagagtc ccacagggct gggacagccc 1021 aaacggagag ggagacctcc cagtaagttc ttcaaacaga tggaacagcg ttacctaacc 1081 cagctgacag cccagcctgt cccacctggc tggtggtgga tacgagatcc tgagatgttg 1141 gatgccatgc tcaaggccct acacccccga ggtatccggg agaaggcact tcacaaacac 1201 cttaacaagc acagggactt cttgcaggaa gtctgcctgc ggccctcagc tgaccccatc 1261 tttgagccca ggcaactacc tgcctttcaa gaagggatta tgagctggtc ccccaaagag 1321 aagacatacg agacagacct agcagtgctt caatgggtag aggagctgga gcagcgggtt 1381 atcatgtctg atctgcagat tcggggctgg acatgtccta gcccagactc tacccgtgaa 1441 gacttggcct actgtgagca cctctccgac tcccaggagg atatcacctg gcgaggtcgg 1501 ggcagggagg gactggcacc tcagcgtaaa actaccaacc ctttggacct ggctgtgatg 1561 cggctggctg ccctggaaca gaatgtagaa cggcggtacc tgcgggagcc cctctggcca 1621 actcatgagg ttgtgctgga gaaggccctg cttagcacac ctaatggtgc ccctgagggc 1681 accactacag agatatcata tgagatcacc cctcgcattc gtgtctggcg ccagaccctc 1741 gagcggtgcc ggagcgcagc ccaggtgtgc ttgtgcctgg gccagctgga gaggtccatt 1801 gcctgggaga agtctgtcaa caaagtgaca tgtctagtct gccggaaggg tgacaatgat 1861 gagtttcttc tgctttgtga tgggtgtgac cgtggctgcc acatttactg ccatcgtccc 1921 aagatggagg ctgtcccaga aggagattgg ttctgtactg tctgtttggc tcagcaggtg 1981 gagggagaat tcactcagaa gcctggtttc ccaaagcgtg gccagaagcg gaaaagtggt 2041 tattcgctga acttctcaga gggtgatggc cgccgacgcc gggtactgtt gaggggccga 2101 gaaagcccag cagcagggcc tcggtactcg gaagaagggc tctccccctc caagcggcgg 2161 cgactctcta tgcggaacca ccacagtgat ctcacatttt gcgagattat cctgatggag 2221 atggagtccc atgatgcagc ctggcctttc ctagagcctg tgaacccacg tttggtgagt 2281 gggtaccggc gcatcatcaa aaatcctatg gatttttcca ccatgcggga gcggctgctc 2341 aggggagggt acaccagctc agaggagttt gcggctgatg ccctcctggt atttgacaac 2401 tgccagactt tcaacgagga tgactctgaa gtaggcaagg ctgggcacat catgcgccgc 2461 ttcttcgaga gccgctggga ggagttttat cagggaaaac aggccaatct gtgaggcaag 2521 ggaggtgggg agtcaccttg tggcatctcc ccccaccttc caaacaaaaa cctgccattt 2581 tcacctgctg atgctgccct gggtccagac tcaagtcaga tacaaccctg atttttgacc 2641 ttgcccttgg cagtgcccca catcctctta ttcctacatc cctttctccc ttccctcctc 2701 ttgctcctca agtaagaggt gcagagatga ggtccttctg gactaaaagc caaaaaaaga 2761 aagaaaaaaa taaaaaaaaa aaaaaaaaaa aaa //