LOCUS BC008964 2910 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphofructokinase, liver, mRNA (cDNA clone MGC:4256
IMAGE:3029577), complete cds.
ACCESSION BC008964
VERSION BC008964.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2910)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2910)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC008964.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: l Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50346003.
FEATURES Location/Qualifiers
source 1..2910
/db_xref="H-InvDB:HIT000034113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4256 IMAGE:3029577"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2910
/gene="PFKL"
/gene_synonym="PFK-B"
/db_xref="GeneID:5211"
/db_xref="HGNC:HGNC:8876"
/db_xref="MIM:171860"
CDS 21..2363
/gene="PFKL"
/gene_synonym="PFK-B"
/codon_start=1
/product="phosphofructokinase, liver"
/protein_id="AAH08964.1"
/db_xref="GeneID:5211"
/db_xref="HGNC:HGNC:8876"
/db_xref="MIM:171860"
/translation="MAAVDLEKLRASGAGKAIGVLTSGGDAQGMNAAVRAVTRMGIYV
GAKVFLIYEGYEGLVEGGENIKQANWLSVSNIIQLGGTIIGSARCKAFTTREGRRAAA
YNLVQHGITNLCVIGGDGSLTGANIFRSEWGSLLEELVAEGKISETTARTYSHLNIAG
LVGSIDNDFCGTDMTIGTDSALHRIMEVIDAITTTAQSHQRTFVLEVMGRHCGYLALV
SALASGADWLFIPEAPPEDGWENFMCERLGETRSRGSRLNIIIIAEGAIDRNGKPISS
SYVKDLVVQRLGFDTRVTVLGHVQRGGTPSAFDRILSSKMGMEAVMALLEATPDTPAC
VVTLSGNQSVRLPLMECVQMTKEVQKAMDDKRFDEATQLRGGSFENNWNIYKLLAHQK
PPKEKSNFSLAILNVGAPAAGMNAAVRSAVRTGISHGHTVYVVHDGFEGLAKGQVQEV
GWHDVAGWLGRGGSMLGTKRTLPKGQLESIVENIRIYGIHALLVVGGFEAYEGVLQLV
EARGRYEELCIVMCVIPATISNNVPGTDFSLGSDTAVNAAMESCDRIKQSASGTKRRV
FIVETMGGYCGYLATVTGIAVGADAAYVFEDPFNIHDLKVNVEHMTEKMKTDIQRGLV
LRNEKCHDYYTTEFLYNLYSSEGNGVFDCRTNVLGHLQQGGAPTPFDRNYGTKLGVKA
MLWLSEKLREVYRKGRVFANAPDSACVIGLKKKAAAFSPVTELKKDTDFEHRMPREQW
WLSLRLMLKMLAQYRISMAAYVSGELEHVTRRTLSMDKGF"
BASE COUNT 575 a 882 c 934 g 519 t
ORIGIN
1 cccgtgtttc ggccgccgcc atggccgcgg tggacctgga gaagctgcgg gcgtcgggcg
61 cgggcaaggc catcggcgtc ctgaccagcg gcggcgacgc gcaaggcatg aacgctgctg
121 tccgggctgt gacgcgcatg ggcatttatg tgggtgccaa agtcttcctc atctacgagg
181 gctatgaggg cctcgtggag ggaggtgaga acatcaagca ggccaactgg ctgagcgtct
241 ccaacatcat ccagctgggc ggcactatca ttggcagcgc tcgctgcaag gcctttacca
301 ccagggaggg gcgccgggca gcggcctaca acctggtcca gcacggcatc accaacctgt
361 gcgtcatcgg cggggatggc agccttacag gtgccaacat cttccgcagc gagtggggca
421 gcctgctgga ggagctggtg gcggaaggta agatctcaga gactacagcc cggacctact
481 cgcacctgaa catcgcgggc ctagtgggct ccatcgataa cgacttctgc ggcaccgaca
541 tgaccatcgg cacggactcg gccctccacc gcatcatgga ggtcatcgat gccatcacca
601 ccactgccca gagccaccag aggaccttcg tgctggaagt gatgggccgg cactgcgggt
661 acctggcgct ggtatctgca ctggcctcag gggccgactg gctgttcatc cccgaggctc
721 cacccgagga cggctgggag aacttcatgt gtgagaggct gggtgagact cggagccgtg
781 ggtcccgact gaacatcatc atcatcgctg agggtgccat tgaccgcaac gggaagccca
841 tctcgtccag ctacgtgaag gacctggtgg ttcagaggct gggcttcgac acccgtgtaa
901 ctgtgctggg ccacgtgcag cggggaggga cgccctctgc cttcgaccgg atcctgagca
961 gcaagatggg catggaggcg gtgatggcgc tgctggaagc cacgcctgac acgccggcct
1021 gcgtggtcac cctctcgggg aaccagtcag tgcggctgcc cctcatggag tgcgtgcaga
1081 tgaccaagga agtgcagaaa gccatggatg acaagaggtt tgacgaggcc acccagctcc
1141 gtggtgggag cttcgagaac aactggaaca tttacaagct cctcgcccac cagaagcccc
1201 ccaaggagaa gtctaacttc tccctggcca tcctgaatgt gggggccccg gcggctggca
1261 tgaatgcggc cgtgcgctcg gcggtgcgga ccggcatctc ccatggacac acagtatacg
1321 tggtgcacga tggcttcgaa ggcctagcca agggtcaggt gcaagaagta ggctggcacg
1381 acgtggccgg ctggttgggg cgtggtggct ccatgctggg gaccaagagg accctgccca
1441 agggccagct ggagtccatt gtggagaaca tccgcatcta tggtattcac gccctgctgg
1501 tggtcggtgg gtttgaggcc tatgaagggg tgctgcagct ggtggaggct cgcgggcgct
1561 acgaggagct ctgcatcgtc atgtgtgtca tcccagccac catcagcaac aacgtccctg
1621 gcaccgactt cagcctgggc tccgacactg ctgtaaatgc cgccatggag agctgtgacc
1681 gcatcaaaca gtctgcctcg gggaccaagc gccgtgtgtt catcgtggag accatggggg
1741 gttactgtgg ctacctggcc accgtgactg gcattgctgt gggggccgac gccgcctacg
1801 tcttcgagga ccctttcaac atccacgact taaaggtcaa cgtggagcac atgacggaga
1861 agatgaagac agacattcag aggggcctgg tgctgcggaa cgagaagtgc catgactact
1921 acaccacgga gttcctgtac aacctgtact catcagaggg caacggcgtc ttcgactgca
1981 ggaccaatgt cctgggccac ctgcagcagg gtggcgctcc aacccccttt gaccggaact
2041 atgggaccaa gctgggggtg aaggccatgc tgtggttgtc ggagaagctg cgcgaggttt
2101 accgcaaggg acgggtgttc gccaatgccc cagactcggc ctgcgtgatc ggcctgaaga
2161 agaaggcggc ggccttcagc cccgtcactg agctcaagaa agacactgat ttcgagcacc
2221 gcatgccacg ggagcagtgg tggctgagcc tgcggctcat gctgaagatg ctggcacaat
2281 accgcatcag tatggccgcc tacgtgtcag gggagctgga gcacgtgacc cgccgcaccc
2341 tgagcatgga caagggcttc tgaggccagc catgcccacg cccctcccca gcccccaccc
2401 atgccagcgc agcgccaggg ctcagatggg gcctgggctg ttgtgtctgg agcctgcagg
2461 caggtggggg ctgcgtccct gctcagccca tcccctgcct ctatccctgg ccacctgcca
2521 ggcctccctc cggctggtgt cttgagacca gcctgccagg ccctccagca ggaggacaga
2581 gtgccctggg gcatccacct tcctgcccag gggacgtggc gctgtcggtg tttggaggct
2641 gctgccccct ggctttggcg ccccatgggc cctcagcgtc tccccatgct gggctcacta
2701 catgggccag cccttgctct acctggccgg taggctgctg gcgcctaggt tgtgttgaga
2761 gggggatgcc cctggccctg cctcactgtg acctgctcct gcccacgtgc agcacctgtc
2821 accttttcta gaaataaaat caccctgact gtggggtgca tcggtctccg gaaaaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//