LOCUS BC008961 1413 bp mRNA linear HUM 29-OCT-2007
DEFINITION Homo sapiens canopy 3 homolog (zebrafish), mRNA (cDNA clone
MGC:4122 IMAGE:2959532), complete cds.
ACCESSION BC008961
VERSION BC008961.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1413)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008961.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41327159.
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000034110"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4122 IMAGE:2959532"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1413
/gene="CNPY3"
/gene_synonym="CAG4A"
/gene_synonym="ERDA5"
/gene_synonym="PRAT4A"
/db_xref="GeneID:10695"
/db_xref="HGNC:HGNC:11968"
/db_xref="MIM:610774"
CDS 69..905
/gene="CNPY3"
/gene_synonym="CAG4A"
/gene_synonym="ERDA5"
/gene_synonym="PRAT4A"
/codon_start=1
/product="canopy 3 homolog (zebrafish)"
/protein_id="AAH08961.1"
/db_xref="GeneID:10695"
/db_xref="HGNC:HGNC:11968"
/db_xref="MIM:610774"
/translation="MDSMPEPASRCLLLLPLLLLLLLLLPAPELGPSQAGAEENDWVR
LPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILDQKASGVKYTKSDLRLIEVTET
ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVA
DLKKQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTSCLAEQWSGKKGDT
AALGGKKSKKKSSRAKAAGGRSSSSKQRKELGGLEGDPSPEEDEGIQKASPLTHSPPD
EL"
BASE COUNT 349 a 398 c 417 g 249 t
ORIGIN
1 aaactgctcc gcgcgcgccg cgggaggagg aaccgcccgg tcctttaggg tccgggcccg
61 gccgggccat ggattcaatg cctgagcccg cgtcccgctg tcttctgctt cttcccttgc
121 tgctgctgct gctgctgctg ctgccggccc cggagctggg cccgagccag gccggagctg
181 aggagaacga ctgggttcgc ctgcccagca aatgcgaagt gtgtaaatat gttgctgtgg
241 agctgaagtc agcctttgag gaaaccggca agaccaagga ggtgattggc acgggctatg
301 gcatcctgga ccagaaggcc tctggagtca aatacaccaa gtcggacttg cggttaatcg
361 aagtcactga gaccatttgc aagaggctcc tggattatag cctgcacaag gagaggaccg
421 gcagcaatcg atttgccaag ggcatgtcag agacctttga gacattacac aacctggtac
481 acaaaggggt caaggtggtg atggacatcc cctatgagct gtggaacgag acttctgcag
541 aggtggctga cctcaagaag cagtgtgatg tgctggtgga agagtttgag gaggtgatcg
601 aggactggta caggaaccac caggaggaag acctgactga attcctctgc gccaaccacg
661 tgctgaaggg aaaagacacc agttgcctgg cagagcagtg gtccggcaag aagggagaca
721 cagctgccct gggagggaag aagtccaaga agaagagcag cagggccaag gcagcaggcg
781 gcaggagtag cagcagcaaa caaaggaagg agctgggtgg ccttgaggga gaccccagcc
841 ccgaggagga tgagggcatc cagaaggcat cccctctcac acacagcccc cctgatgagc
901 tctgagccca cccagcatcc tctgtcctga gacccctgat tttgaagctg aggagtcagg
961 ggcatggctc tggcaggccg ggatggcccc gcagccttca gcccctcctt gccttggctg
1021 tgccctcttc tgccaaggaa agacacaagc cccaggaaga actcagagcc gtcatgggta
1081 gcccacgccg tcctttcccc tccccaagtg tttctctcct gacccagggt tcaggcaggc
1141 cttgtggttt caggactgca aggactccag tgtgaactca ggaggggcag gtgtcagaac
1201 tgggcaccag gactggagcc ccctccggag accaaactca ccatccctca gtcctcccca
1261 acagggtact aggactgcag ccccctgtag ctcctctctg cttaccctac ctgtggacac
1321 cttgcactct gcctggccct tcccagagcc caaagagtaa aaatgttctg gttctgaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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