LOCUS BC008960 2204 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens pipecolic acid oxidase, mRNA (cDNA clone MGC:4070 IMAGE:2961289), complete cds. ACCESSION BC008960 VERSION BC008960.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2204) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2204) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008960.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: p Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 60499000. FEATURES Location/Qualifiers source 1..2204 /db_xref="H-InvDB:HIT000034109" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4070 IMAGE:2961289" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2204 /gene="PIPOX" /gene_synonym="LPIPOX" /db_xref="GeneID:51268" /db_xref="HGNC:HGNC:17804" CDS 327..1499 /gene="PIPOX" /gene_synonym="LPIPOX" /codon_start=1 /product="pipecolic acid oxidase" /protein_id="AAH08960.1" /db_xref="GeneID:51268" /db_xref="HGNC:HGNC:17804" /translation="MAAQKDLWDAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHS RGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAGTQLHRQTGLLLLGMKENQE LKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQD AIRQLGGIVRDGEKVVEINPGLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMP LQTLRINVCYWREMVPGSYGVSQAFPCFLWLGLCPHHIYGLPTGEYPGLMKVSYHHGN HADPEERDCPTARTDIGDVQILSSFVRDHLPDLKPEPAVIESCMYTNTPDEQFILDRH PKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRFPSLGKAHL" BASE COUNT 559 a 571 c 601 g 473 t ORIGIN 1 gagacaggaa ggtggcaaag gaaggagccc atttgcatga caataattga gccaagaata 61 gaaagccaca gggatgcaag ggtgaggctg gcggctgagc tgggctaaac ctcacaaatc 121 agactaccca gctctgctcc gcaggggaag ggagactgag ccctgggcca ggcttggcag 181 agagggaagc gggaggacac gaccccaggg cattgtggga acactggcca ggctggactt 241 tgccttcctc ctcgtccttt agccgggagc ctgtctttgc ttgcctttgc ctttgaggct 301 ctgtggctgt ggggctgagt ggcatcatgg cggctcagaa agatctctgg gacgccattg 361 tgattggggc ggggatccag ggctgcttca ctgcatacca cctggccaaa cacaggaaga 421 ggatcctcct gctggagcag ttctttctac cacactcccg aggaagctcc catggacaaa 481 gccggataat ccgaaaggcg tacctggaag acttttacac ccggatgatg catgagtgct 541 atcagatatg ggcccagctg gagcacgagg ctggaaccca attgcacagg cagactggat 601 tactgctgct gggaatgaaa gagaatcaag aattaaagac aatccaggcc aatctgtcga 661 ggcagagggt agaacaccag tgtctttcat ctgaggaact gaagcaacgt ttcccaaata 721 ttcggttgcc caggggagaa gtggggctct tggacaattc cggaggagtt atctatgcat 781 ataaggccct cagagccctg caggatgcaa ttcgacagct aggaggcata gtgcgtgacg 841 gagagaaggt ggtggagata aacccagggc tactggtcac ggtgaaaacc acctccagga 901 gctaccaagc taagagcttg gtcatcacag caggtccttg gaccaaccag ctcctccgtc 961 ccctgggcat tgagatgcct ctccagaccc tgcggatcaa cgtgtgttac tggcgagaga 1021 tggttcctgg gagctatggt gtgtcccagg cctttccgtg cttcctgtgg ctgggcttgt 1081 gtccccacca catctacgga ctgcccacag gagagtaccc agggctgatg aaggtcagct 1141 atcaccacgg caaccacgca gaccctgagg agcgggactg ccccacagca cgcacagaca 1201 tcggagacgt ccagatcctg agcagctttg tcagagatca cttacctgat ctgaagcccg 1261 agcctgctgt cattgagagc tgcatgtaca cgaatacccc tgatgagcag ttcattctcg 1321 atcgccaccc aaagtatgac aacattgtca ttggtgctgg attctctggg cacgggttca 1381 agctggcccc tgtggtgggg aagatcctgt atgaattaag catgaaatta acaccatctt 1441 atgacttggc accttttcga atcagccgtt tcccaagcct gggcaaagcc cacctttgac 1501 ctctggccag aagcctccct tctgtgcaca ggagccagtt tcacagatgg agaagatgtc 1561 tcagatgaag ggagtgtccc tgagatatca tccttttctt ctgcctcgcc tgaatccccc 1621 ataaacacca gatgattgag tctaccttct ttccttggcc cgctcccttt ttcttctgcc 1681 tcacttgaat cccccgtaaa caccagacga ttgagtctac cttcttttct tggccacctc 1741 cccattcaca actactttct cgctcccaga aggttgatca gatattctac aatcacagag 1801 tagcaaggac gtttgagatg ggtatatcag taagaagagg gcacaagaac tggctctgga 1861 gaccaaagca gttgttaaaa attctctttg ctgggggccg ggtgtggtgg ctcacacctg 1921 taatctcggc actttggggg gctgagacag gcggatcacc tgaggccagg aattcaagac 1981 cagcctggcc aacatggtga aaccctatct ccactaaaaa tacaaaatta gctgggtgtg 2041 gtggcgcatg cctgtaatcc cagctacttg ggagactgag gcaagagaat cacttgaacc 2101 cgggaggtgg aggtggcagt gagccgagat tgcgccattg cactccagcc tgggcaaaaa 2161 gagtgagact ctgtctcaaa aaaaaaaaaa aaaaaaaaaa aaaa //