LOCUS BC008944 1846 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2 variant 1, mRNA (cDNA
clone IMAGE:2960953), partial cds.
ACCESSION BC008944
VERSION BC008944.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1846)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1846)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC008944.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49169840.
FEATURES Location/Qualifiers
source 1..1846
/db_xref="H-InvDB:HIT000087176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2960953"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1846
/gene="UBE2V1"
/gene_synonym="CIR1"
/gene_synonym="CROC-1"
/gene_synonym="CROC1"
/gene_synonym="UEV-1"
/gene_synonym="UEV1"
/gene_synonym="UEV1A"
/db_xref="GeneID:7335"
/db_xref="HGNC:HGNC:12494"
/db_xref="MIM:602995"
CDS <1..431
/gene="UBE2V1"
/gene_synonym="CIR1"
/gene_synonym="CROC-1"
/gene_synonym="CROC1"
/gene_synonym="UEV-1"
/gene_synonym="UEV1"
/gene_synonym="UEV1A"
/codon_start=3
/product="UBE2V1 protein"
/protein_id="AAH08944.2"
/db_xref="GeneID:7335"
/db_xref="HGNC:HGNC:12494"
/db_xref="MIM:602995"
/translation="GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWT
GMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISV
LAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN"
BASE COUNT 508 a 458 c 383 g 497 t
ORIGIN
1 cgggctcggg agtaaaagtc cctcgcaatt tccgactgtt ggaagaactc gaagaaggcc
61 agaaaggagt aggagatggc acagttagct ggggtctaga agatgacgaa gacatgacac
121 ttacaagatg gacagggatg ataattgggc ctccaagaac aatttatgaa aaccgaatat
181 acagccttaa aatagaatgt ggacctaaat acccagaagc accccccttt gtaagatttg
241 taacaaaaat taatatgaat ggagtaaata gttctaatgg agtggtggac ccaagagcca
301 tatcagtgct agcaaaatgg cagaattcat atagcatcaa agttgtcctg caagagcttc
361 ggcgcctaat gatgtctaaa gaaaatatga aactccctca gccgcccgaa ggacagtgtt
421 acagcaatta atcaaaaaga aaaaccacag gcccttcccc ttccccccaa ttcgatttaa
481 tcagtcttca ttttccacag tagtaaattt tctagatacg tcttgtagac ctcaaagtac
541 cggaaaggaa gctcccattc aaaggaaatt tatcttaaga tactgtaaat gatactaatt
601 ttttgtccat ttgaaatata taagttgtgc tataacaaat catcctgtca agtgtaacca
661 ctgtccacgt agttgaactt ctgggatcaa gaaagtctat ttaaattgat tcccatcata
721 actggtgggg cacatctaac tcaactgtga aaagacacat cacacaatca ccttgctgct
781 gattacacgg cctggggtct ctgccttctc cccttaccct cccgcctccc accctccctg
841 caacaacagc cctctagcct ggggggcttg ttagagtaga tgtgaaggtt tcaggtcgca
901 gcctgtggga ctactgctag gtgtgtgggg tgtttcgcct gcacccctgg tttctttaag
961 tcttaagtga tgccccttcc aaaccatcat cctgtcccca cgctcctcca ctcccgccct
1021 tggccgaagc atagattgta acccctccac tcccctctga gattggcctt cggtgaggaa
1081 ttcagggctt tccccatatc ttctctcccc cacctttatc gaggggtgct gctttttctc
1141 cctcctcctc aagttccttt ttgcaccgtc accacccaac accttccatg acacttcctt
1201 gctttggcca gaagccatca ggtaaggttg gaaagagcct ctgacctccc ttgtttagtt
1261 ttggaaccat actcactcac tctccaccag cctgggaaat gaatattggg tcctcagccc
1321 tgccaccctc tgctgtcatc agctgatgca ttgtttttag ctcaggtttt gataaggtga
1381 aaagaatagt caccagggtt actcagacct gccagctctc ggagtccttg gtggttgaac
1441 ttggagaaag accgcatgaa gatacttgta agcacacatg atccctctga attgttttac
1501 tttcctgtaa ctgcttttgc ttttaaaaat tgaagaagtt ttaaacaggg ctttcatttg
1561 gtcatccttg caatccattg gggtctagtt tggaatctga caactggaac aaaaagaacc
1621 ttgaatccgg tgcatgcctt ggttttggtg ctgctgctgc ttcccaagat cctcagcagg
1681 gattaagaag gaacccggtg tgcacagcag atccccgaaa ttggtgggct tgacctcctg
1741 gcaaattgct gcgtctttcc acttgctgtt caggaccact aaatgctgaa atgtggatgc
1801 ataccgaaat aaaagcaatt cattgtgtaa aaaaaaaaaa aaaaaa
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