LOCUS BC008938 1625 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens histocompatibility (minor) 13, mRNA (cDNA clone MGC:2423 IMAGE:2961249), complete cds. ACCESSION BC008938 VERSION BC008938.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1625) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1625) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC008938.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 2 Row: j Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 70609888. FEATURES Location/Qualifiers source 1..1625 /db_xref="H-InvDB:HIT000034092" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2423 IMAGE:2961249" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1625 /gene="HM13" /gene_synonym="dJ324O17.1" /gene_synonym="H13" /gene_synonym="IMP1" /gene_synonym="IMPAS" /gene_synonym="MSTP086" /gene_synonym="PSENL3" /gene_synonym="PSL3" /gene_synonym="SPP" /db_xref="GeneID:81502" /db_xref="HGNC:HGNC:16435" /db_xref="MIM:607106" CDS 114..1247 /gene="HM13" /gene_synonym="dJ324O17.1" /gene_synonym="H13" /gene_synonym="IMP1" /gene_synonym="IMPAS" /gene_synonym="MSTP086" /gene_synonym="PSENL3" /gene_synonym="PSL3" /gene_synonym="SPP" /codon_start=1 /product="histocompatibility (minor) 13" /protein_id="AAH08938.1" /db_xref="GeneID:81502" /db_xref="HGNC:HGNC:16435" /db_xref="MIM:607106" /translation="MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMAL LPIFFGALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYIN LLLSMYFFVLGILALSHTISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDT KDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIY DVFWVFGTNVMVTVAKFFEAPIKLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALL LRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVA LAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASKGLEKKEK" BASE COUNT 385 a 487 c 402 g 351 t ORIGIN 1 aacccttcct gttgccttag gggaacgtgg ctttccctgc agagccggtg tctccgcctg 61 cgtccctgct gcagcaaccg gagctggagt cggatcccga acgcaccctc gccatggact 121 cggccctcag cgatccgcat aacggcagtg ccgaggcagg cggccccacc aacagcacta 181 cgcggccgcc ttccacgccc gagggcatcg cgctggccta cggcagcctc ctgctcatgg 241 cgctgctgcc catcttcttc ggcgccctgc gctccgtacg ctgcgcccgc ggcaagaatg 301 cttcagacat gcctgaaaca atcaccagcc gggatgccgc ccgcttcccc atcatcgcca 361 gctgcacact cttggggctc tacctctttt tcaaaatatt ctcccaggag tacatcaacc 421 tcctgctgtc catgtatttc ttcgtgctgg gaatcctggc cctgtcccac accatcagcc 481 ccttcatgaa taagtttttt ccagccagct ttccaaatcg acagtaccag ctgctcttca 541 cacagggttc tggggaaaac aaggaagaga tcatcaatta tgaatttgac accaaggacc 601 tggtgtgcct gggcctgagc agcatcgttg gcgtctggta cctgctgagg aagcactgga 661 ttgccaacaa cctttttggc ctggccttct cccttaatgg agtagagctc ctgcacctca 721 acaatgtcag cactggctgc atcctgctgg gcggactctt catctacgat gtcttctggg 781 tatttggcac caatgtgatg gtgacagtgg ccaagttctt cgaggcacca ataaaattgg 841 tgtttcccca ggatctgctg gagaaaggcc tcgaagcaaa caactttgcc atgctgggac 901 ttggagatgt cgtcattcca gggatcttca ttgccttgct gctgcgcttt gacatcagct 961 tgaagaagaa tacccacacc tacttctaca ccagctttgc agcctacatc ttcggcctgg 1021 gccttaccat cttcatcatg cacatcttca agcatgctca gcctgccctc ctatacctgg 1081 tccccgcctg catcggtttt cctgtcctgg tggcgctggc caagggagaa gtgacagaga 1141 tgttcagtta tgaggagtca aatcctaagg atccagcggc agtgacagaa tccaaagagg 1201 gaacagaggc atcagcatcg aaggggctgg agaagaaaga gaaatgatgc agctggtgcc 1261 cgagcctctc agggccagac cagacagatg ggggctgggc ccacacaggc gtgcaccggt 1321 agagggcaca ggaggccaag ggcagctcca ggacagggca gggggcagca ggatacctcc 1381 agccaggcct ctgtggcctc tgtttccttc tccctttctt ggccctcctc tgctcctccc 1441 cacaccctgc aggcaaaaga aacccccagc ttcccccctc cccgggagcc aggtgggaaa 1501 agtgggtgtg atttttagat tttgtattgt ggactgattt tgcctcacat taaaaactca 1561 tcccatggcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1621 aaaaa //