LOCUS       BC008909                2564 bp    mRNA    linear   HUM 09-DEC-2003
DEFINITION  Homo sapiens pleckstrin homology domain interacting protein, mRNA
            (cDNA clone IMAGE:3830844), partial cds.
ACCESSION   BC008909
VERSION     BC008909.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Dec 9, 2003 this sequence version replaced BC008909.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 24 Row: p Column: 2
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 20149647.
FEATURES             Location/Qualifiers
     source          1..2564
                     /db_xref="H-InvDB:HIT000034070"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3830844"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_20"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..2564
                     /gene="PHIP"
                     /gene_synonym="FLJ20705"
                     /gene_synonym="ndrp"
                     /gene_synonym="WDR11"
                     /db_xref="GeneID:55023"
     CDS             <1..2420
                     /gene="PHIP"
                     /gene_synonym="FLJ20705"
                     /gene_synonym="ndrp"
                     /gene_synonym="WDR11"
                     /codon_start=3
                     /product="PHIP protein"
                     /protein_id="AAH08909.2"
                     /db_xref="GeneID:55023"
                     /translation="TLCCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDD
                     AKYRRWNIGDRFRSVIDDAWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPW
                     DMELIPNNAVFPEELGTSVPLTDGECRSLIYKPLDGEWGTNPRDEECERIVAGINQLM
                     TLDIASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHN
                     TRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDADV
                     PGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEY
                     PDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL
                     RLSAFFEEHISSVLSDYKSALRFHKRNTITKRRKKRNRSSSVSSSAASSPERKKRILK
                     PQLKSESSTSAFSTPTRSIPPRHNAAQINGKTESSSVVRTRSNRVVVDPVVTEQPSTS
                     SAAKTFITKANASAIPGKTILENSVKHSKALNTLSSPGQSSFSHGTRNNSAKENMEKE
                     KPVKRKMKSSVLPKASTLSKSSAVIEQGDCKNNALVPGTIQVNGHGGQPSKLVKRGPG
                     RKPKVEVNTNSGEIIHKKRGRKPKKLQYAKPEDLEQNNVHPIRDEVLPSSTCNFLSET
                     NNVKEDLLQKKNRGGRKPKRKMKTQKLDADLLVPASVKVLRRSNRKKIDDPIDEEEEF
                     EELKGSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTSSRGRVRKLTEKA
                     KANLIGW"
     misc_feature    468..740
                     /gene="PHIP"
                     /gene_synonym="FLJ20705"
                     /gene_synonym="ndrp"
                     /gene_synonym="WDR11"
                     /note="BROMO; Region: bromo domain"
                     /db_xref="CDD:smart00297"
     misc_feature    903..1208
                     /gene="PHIP"
                     /gene_synonym="FLJ20705"
                     /gene_synonym="ndrp"
                     /gene_synonym="WDR11"
                     /note="BROMO; Region: bromo domain"
                     /db_xref="CDD:smart00297"
BASE COUNT          895 a          470 c          536 g          663 t
ORIGIN      
        1 ctaccctttg ctgccttaaa cttgcttttc tagatcctga tactggtaaa ctgactggcg
       61 gatcatttac catgaaatac catgatatgc ctgacgttat agatttccta gtcttgagac
      121 aacaatttga tgatgcaaaa tacaggcgat ggaatatagg tgaccgcttc aggtctgtca
      181 tagatgatgc ctggtggttt ggaacaatcg aaagccagga acctcttcaa cctgagtacc
      241 ctgatagtct gtttcaatgc tacaatgttt gctgggacaa tggagataca gaaaagatga
      301 gtccttggga tatggagctt atacctaata atgctgtatt tcctgaagaa ctaggtacca
      361 gtgttccttt aactgatggt gagtgcagat cactaatcta taaacctctt gatggagaat
      421 ggggtaccaa tcccagggat gaagaatgtg aaagaattgt ggcaggaata aaccagttga
      481 tgacactaga tattgcctca gcatttgtgg cccccgtgga tctgcaagcc tatcccatgt
      541 attgcacagt agtggcatat ccaacggatc taagtacaat taaacaaaga ctggaaaaca
      601 ggttttacag gcgggtttct tccctaatgt gggaagttcg atatatagag cataatacac
      661 gaacatttaa tgagcctgga agccctattg tgaaatctgc taaattcgtg actgatcttc
      721 ttctacattt tataaaggat cagacttgtt ataacataat tccactttat aattcaatga
      781 agaagaaagt tttgtctgat tctgaggatg aagagaaaga tgctgatgtg ccaggaactt
      841 ctactcgaaa aaggaaggac catcagccta gaagaagatt acgtaataga gcccagtctt
      901 acgatattca agcatggaag aaacagtgtg aagaattgtt aaatctcata tttcaatgtg
      961 aagattcaga gcctttccgt cagccggtag atctccttga atatccagac tacagagaca
     1021 tcattgacac tccaatggat tttgctaccg ttagagaaac tttagaggct gggaattatg
     1081 agtcaccaat ggagttatgt aaagatgtca gacttatttt cagtaattcc aaagcatata
     1141 caccaagcaa aagatcaagg atttacagca tgagtttgcg cttgtctgca ttctttgaag
     1201 aacacattag ttcagtttta tcagattata aatctgctct tcgttttcat aaaagaaata
     1261 ccataaccaa aaggaggaag aaaagaaaca gaagcagctc tgtttccagt agtgctgcat
     1321 caagccctga aaggaaaaaa aggatcttaa aaccccagct aaaatcagaa agctctacct
     1381 ctgcattctc tacacctaca cgatcaatac cgccaagaca caatgctgct cagataaacg
     1441 gtaaaacaga atctagttct gtggttcgaa ccagaagcaa ccgagtggtt gtagatccag
     1501 ttgtcactga gcaaccatct acttcttcag ctgcaaagac ttttattaca aaagctaatg
     1561 catctgcaat accagggaaa acaatactag agaattctgt gaaacattcc aaagctttga
     1621 atactctttc cagtcctggt caatccagtt ttagtcatgg cactaggaat aattctgcaa
     1681 aagaaaacat ggaaaaggaa aagccagtca aacgtaaaat gaagtcatct gtactcccaa
     1741 aggcgtccac tctttcaaag tcatcagctg tcattgagca aggagattgt aagaacaacg
     1801 ctcttgtacc aggaaccatt caagtaaatg gccatggagg acagccatca aaacttgtga
     1861 agaggggacc tggaaggaaa cctaaagtag aagttaatac caatagtggt gaaattatac
     1921 acaagaaaag gggtagaaag cccaaaaagc tacagtatgc aaagccagaa gatttagagc
     1981 aaaataatgt gcatcccatc agagatgaag tacttccttc ttcaacatgc aattttcttt
     2041 ctgaaactaa taatgtaaag gaagatttgt tacagaaaaa gaatcgtgga ggtaggaagc
     2101 ccaaaaggaa gatgaagaca caaaaattag atgcagatct cctagtccct gcaagtgtca
     2161 aagtgttaag gagaagtaac cgaaaaaaga tagatgatcc tatagatgag gaagaagagt
     2221 ttgaagaact caaaggctct gaaccccaca tgagaactag aaatcaaggt cgaaggacag
     2281 ctttctataa tgaggatgac tctgaagagg agcaaaggca gctgttgttc gaagacacct
     2341 ctttaacttt tggaacttct agtagaggac gagtccgaaa gttgactgaa aaagcaaaag
     2401 ctaatttaat tggttggtaa cttgtaccaa aatattttac ttcaaaatct ataaagcagg
     2461 tacagttaag gaataagtag aactaaggct tctgcttcct tgctgctgtg gtggagtagg
     2521 gaatgttatg atttgatttg caaaaaaaaa aaaaaaaaaa aaaa
//