LOCUS BC008904 1823 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens gasdermin D, mRNA (cDNA clone MGC:15043
IMAGE:3634992), complete cds.
ACCESSION BC008904
VERSION BC008904.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1823)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1823)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008904.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: b Column: 15.
FEATURES Location/Qualifiers
source 1..1823
/db_xref="H-InvDB:HIT000034066"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15043 IMAGE:3634992"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1823
/gene="GSDMD"
/gene_synonym="DF5L"
/gene_synonym="FKSG10"
/gene_synonym="GSDMDC1"
/db_xref="GeneID:79792"
/db_xref="HGNC:HGNC:25697"
CDS 135..1589
/gene="GSDMD"
/gene_synonym="DF5L"
/gene_synonym="FKSG10"
/gene_synonym="GSDMDC1"
/codon_start=1
/product="gasdermin D"
/protein_id="AAH08904.1"
/db_xref="GeneID:79792"
/db_xref="HGNC:HGNC:25697"
/translation="MGSAFERVVRRVVQELDHGGEFIPVTSLQSSTGFQPYCLVVRKP
SSSWFWKPRYKCVNLSIKDILEPDAAEPDVQRGRSFHFYDAMDGQIQGSVELAAPGQA
KIAGGAAVSDSSSTSMNVYSLSVDPNTWQTLLHERHLRQPEHKVLQQLRSRGDNVYVV
TEVLQTQKEVEVTRTHKREGSGRFSLPGATCLQGEGQGHLSQKKTVTIPSGSTLAFRV
AQLVIDSDLDVLLFPDKKQRTFQPPATGHKRSTSEGAWPQLPSGLSMMRCLHNFLTDG
VPAEGAFTEDFQGLRAEVETISKELELLDRELCQLLLEGLEGVLRDQLALRALEEALE
QGQSLGPVEPLDGPAGAVLECLVLSSGMLVPELAIPVVYLLGALTMLSETQHKLLAEA
LESQTLLGPLELVGSLLEQSAPWQERSTMSLPPGLLGNSWGEGAPAWVLLDECGLELG
EDTPHVCWEPQAQGRMCALYASLALLSGLSQEPH"
BASE COUNT 402 a 528 c 594 g 299 t
ORIGIN
1 cctgggcggg ccctgcgtca ggttgcagtt tcacttttag ctctgggcac ctccagctcc
61 tgctcgccgg acggctccca gggagagcag acgcgccaga cgcgccaccc tcggggcgcc
121 gacggtcacg gagcatgggg tcggcctttg agcgggtagt ccggagagtg gtccaggagc
181 tggaccatgg tggggagttc atccctgtga ccagcctgca gagctccact ggcttccagc
241 cctactgcct ggtggttagg aagccctcaa gctcatggtt ctggaaaccc cgttataagt
301 gtgtcaacct gtctatcaag gacatcctgg agccggatgc cgcggaacca gacgtgcagc
361 gtggcaggag cttccacttc tacgatgcca tggatgggca gatacagggc agcgtggagc
421 tggcagcccc aggacaggca aagatcgcag gcggggccgc ggtgtctgac agctccagca
481 cctcaatgaa tgtgtactcg ctgagtgtgg accctaacac ctggcagact ctgctccatg
541 agaggcacct gcggcagcca gaacacaaag tcctgcagca gctgcgcagc cgcggggaca
601 acgtgtacgt ggtgactgag gtgctacaga cacagaagga ggtggaagtc acgcgcaccc
661 acaagcggga gggctcgggc cggttttccc tgcccggagc cacgtgcttg cagggtgagg
721 gccagggcca tctgagccag aagaagacgg tcaccatccc ctcaggcagc accctcgcat
781 tccgggtggc ccagctggtt attgactctg acttggacgt ccttctcttc ccggataaga
841 agcagaggac cttccagcca cccgcgacag gccacaagcg ttccacgagc gaaggcgcct
901 ggccacagct gccctctggc ctctccatga tgaggtgcct ccacaacttc ctgacagatg
961 gggtccctgc ggagggggcg ttcactgaag acttccaggg cctacgggca gaggtggaga
1021 ccatctccaa ggaactggag cttttggaca gagagctgtg ccagctgctg ctggagggcc
1081 tggagggggt gctgcgggac cagctggccc tgcgagcctt ggaggaggcg ctggagcagg
1141 gccagagcct tgggccggtg gagcccctgg acggtccagc aggtgctgtc ctggagtgcc
1201 tggtgttgtc ctccggaatg ctggtgccgg aactcgctat ccctgttgtc tacctgctgg
1261 gggcactgac catgctgagt gaaacgcagc acaagctgct ggcggaggcg ctggagtcgc
1321 agaccctgtt ggggccgctc gagctggtgg gcagcctctt ggagcagagt gccccgtggc
1381 aggagcgcag caccatgtcc ctgccccccg ggctcctggg gaacagctgg ggcgaaggag
1441 caccggcctg ggtcttgctg gacgagtgtg gcctagagct gggggaggac actccccacg
1501 tgtgctggga gccgcaggcc cagggccgca tgtgtgcact ctacgcctcc ctggcactgc
1561 tatcaggact gagccaggag ccccactagc ctgtgcccgg gcatggcctg gcagctctcc
1621 agcagggcag agtgtttgcc caccagctgc tagccctagg aaggccagga gcccagtagc
1681 catgtggcca gtctaccatg gggcccagga gttggggaaa cacaataaag gtggcatacg
1741 aaggaaaaaa aaaaaaaaaa aaaaaccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaa
//