LOCUS BC008893 3316 bp mRNA linear HUM 24-JUN-2004
DEFINITION Homo sapiens WD repeat domain 40A, mRNA (cDNA clone IMAGE:2966568),
partial cds.
ACCESSION BC008893
VERSION BC008893.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3316)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3316)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC008893.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: k Column: 1.
FEATURES Location/Qualifiers
source 1..3316
/db_xref="H-InvDB:HIT000034059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2966568"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3316
/gene="WDR40A"
/gene_synonym="DKFZP434O125"
/gene_synonym="MGC1058"
/db_xref="GeneID:25853"
CDS <1..1267
/gene="WDR40A"
/gene_synonym="DKFZP434O125"
/gene_synonym="MGC1058"
/codon_start=2
/product="WDR40A protein"
/protein_id="AAH08893.2"
/db_xref="GeneID:25853"
/translation="LHKRKRLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLP
SLLKEREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPG
GVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAW
ISDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPVYAHITHKALKDIPKEDTNP
DNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEW
SVYAVGSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYD
IRAQRFLEERLSACYGSKPRLAGENLKLTTGKGWLNHDETWRNYFSDIDFFPNAVYTH
CYDSSGTKLFVAGGPLPSGLHGNYAGLWS"
BASE COUNT 902 a 724 c 717 g 973 t
ORIGIN
1 gcttcacaaa aggaaaagac ttcctcctgt gaagagatcc ttagtatact acttgaagaa
61 ccgggaagtc aggctacaga atgaaaccag ctactctcga gtgttgcatg gttatgcagc
121 acagcaactt cccagtctcc tgaaggagag agagtttcac cttgggaccc ttaataaagt
181 gtttgcatct cagtggttga atcataggca agtggtgtgt ggcacaaaat gcaacacgct
241 atttgtcgta gatgtccaga caagccagat caccaagatc cccattctga aagaccggga
301 gcctggaggt gtgacccagc agggctgtgg tatccatgcc atcgagctga atccttctag
361 aacactgcta gccactggag gagacaaccc caacagtctt gccatctatc gactacctac
421 gctggatcct gtgtgtgtag gagatgatgg acacaaggac tggatctttt ccatcgcatg
481 gatcagcgac actatggcag tgtctggctc acgtgatggt tctatgggac tctgggaggt
541 gacagatgat gttttgacca aaagtgatgc gagacacaat gtgtcacggg tccctgtgta
601 tgcacacatc actcacaagg ccttaaagga catccccaaa gaagacacaa accctgacaa
661 ctgcaaggtt cgggctctgg ccttcaacaa caagaacaag gaactgggag cagtgtctct
721 ggatggctac tttcatctct ggaaggctga aaatacacta tctaagctcc tctccaccaa
781 actgccatat tgccgtgaga atgtgtgtct ggcttatggt agtgaatggt cagtttatgc
841 agtgggctcc caagctcatg tctccttctt ggatccacgg cagccatcat acaacgtcaa
901 gtctgtctgt tccagggagc gaggcagtgg aatccggtca gtgagtttct acgagcacat
961 catcactgtg ggaacagggc agggctccct gctgttctat gacatccgag ctcagagatt
1021 tctggaagag aggctctcag cttgttatgg gtccaagccc agactagcag gggagaatct
1081 gaaactaacc actggcaaag gctggctgaa tcatgatgaa acctggagga attacttttc
1141 agacattgac ttcttcccca atgctgttta cacccactgc tacgactcgt ctggaacgaa
1201 actctttgtg gcaggaggtc ccctcccttc agggctccat ggaaactatg ctgggctctg
1261 gagttaatga caactcccca aatgcagaga tttacactaa cttccattct cagtttcctt
1321 gtttcttttg attttttttt tcctaattgt gtgaggctct tgtgttttag tgggaacacc
1381 aaagtttgcc tatagtttag gcacttaata ggaagaagct ctgtacagaa atctgaaagt
1441 tgttttgctt tttgttttcc cccttggtaa tcaaaatttt actatctttt attatttctg
1501 gcttttcaac caaacattgt tgctaatccc tatttttctt taagtgacac acattctcct
1561 gtctctggct tcttcaggct gaaatgacat agtctttctc acccttactt cactcttgag
1621 aggtagggct cctttataat tacatggttg ctctcagact ttctgtgaaa gtttgggagc
1681 tgtgtgtgtc tgtgtgtgtg tgagagagag atcttgtctg cgtgtgtgtg tgtgatcttg
1741 tgtgcctgta ggtactgtgt gtcactgaaa ttacctggag tgaggattac ttgtaattaa
1801 aatatttata aaagaaacaa ctttattcac agagtccagc tttgggacta gtctgtatct
1861 tgttttttaa gtctaacaac actgataata ggaagtaaaa acagaaagga aaagaaatta
1921 ccactgggaa aatcttttta gttagattgt aggcttcctg gggcctccca tgccaggact
1981 gcaaagtgat ccagccctac ctgtcttccc acctgtgtgt cccccgtgtg ggaagttggt
2041 gtcacttccc cttcccaccc tcacatctgc ttagccagta gccacacccc taaaacatca
2101 gactcaccat ccaggtgcag ctccagaggc tacaaaaggc ttcatgggac ttgaatcccc
2161 atcctagctt ctctctcctt cccctcaaga cctgatctgg ttttaagggg cctggagctg
2221 ggagtctcaa gtctgctaag attcacatcc atagcccccg tggctttgag gagaatcctc
2281 tctgccattc ttccaatctc cccagtgggt tttgctatta ttttctaaat tgggttaagt
2341 ctaagaaggt gggggtgagc agggggttta tctatgtgta gtgagtgctt catgtgtgga
2401 atattcattt tcttactgca gtgggacttg gggttgaagc cacccctcct actctgttgg
2461 cttagccctg agatggtgac aggctggcct gcagtcagca tcattgtgca tgtgacagca
2521 tcaatgtgat tagtaatttg tctgttcctc ccttgaactg tctgtttagt ctgaggtttt
2581 taaacttgca ggcagctgac tgtgatgtcc acttgttccc tgatttttac acatcatgtc
2641 aaagataaca gctgttccca cccaccagtt cctctaagca catactctgc ttttctgtca
2701 acatcccatt ttggggaaag gaaaagtcat atttattcct gcaccccagt tttttaactt
2761 gttctcccag ttgtccccct cttctctggg tgtaagaagg gaaattggaa aaaaaattat
2821 atatatattc tccttttaat ggtggggggc tactggagag gagagacagc aagtccaccc
2881 taacttgtta cacagcacat accacaggtt ctggaattct catcttcgaa cctagagaaa
2941 taggtgctat aaacagggaa ttaagcaaaa tgctggatgc tatagatctt ttaattgtct
3001 taattttttt tctattatta aactacaggc tgtagatttc ttagttctca cagaacttct
3061 atcattttaa actgacttgt atatttaaaa aaaaaatctt cagtaggatg ttttgtacta
3121 ttgctagacc ctcttctgta atgggtaatg cgtttgattg tttgagattt tctgttttta
3181 aaaatgtagc acttgacttt ttgccaagga aaaaaataaa aattattcca gtgcaaaaaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaaaa aaaaaa
//