LOCUS BC008890 569 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens ubiquitously-expressed transcript, mRNA (cDNA clone
MGC:19543 IMAGE:3959862), complete cds.
ACCESSION BC008890
VERSION BC008890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 569)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: l Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24041015.
FEATURES Location/Qualifiers
source 1..569
/db_xref="H-InvDB:HIT000034056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19543 IMAGE:3959862"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..569
/gene="UXT"
/gene_synonym="ART-27"
/db_xref="GeneID:8409"
/db_xref="MIM:300234"
CDS 11..484
/gene="UXT"
/gene_synonym="ART-27"
/codon_start=1
/product="UXT protein"
/protein_id="AAH08890.1"
/db_xref="GeneID:8409"
/db_xref="MIM:300234"
/translation="MATPPKRRAVEATGEKVLRYETFISDVLQRDLRKVLDHRDKVYE
QLAKYLQLRNVIERLQEAKHSELYMQVDLGCNFFVDTVVPDTSRIYVALGYGFFLELT
LAEALKFIDRKSSLLTELSNSLTKDSMNIKAHIHMLLEGLRELQGLQNFPEKPHH"
misc_feature 62..421
/gene="UXT"
/gene_synonym="ART-27"
/note="DUF232; Region: Putative transcriptional regulator.
Members of this family range in length from 140-180 amino
acids. One member interacts with c-Myc and represses its
transcriptional activity. Suggesting that other members of
this family may also regulate transcription by interacting
with as yet unknown partners"
/db_xref="CDD:pfam02996"
BASE COUNT 175 a 138 c 137 g 119 t
ORIGIN
1 ggagcccatc atggcgacgc cccctaagcg gcgggcggtg gaggccacgg gggagaaagt
61 gctgcgctac gagaccttca tcagtgacgt gctgcagcgg gacttgcgaa aggtgctgga
121 ccatcgagac aaggtatatg agcagctggc caaatacctt caactgagaa atgtcattga
181 gcgactccag gaagctaagc actcggagtt atatatgcag gtggatttgg gctgtaactt
241 cttcgttgac acagtggtcc cagatacttc acgcatctat gtggccctgg gatatggttt
301 tttcctggag ttgacactgg cagaagctct caagttcatt gatcgtaaga gctctctcct
361 cacagagctc agcaacagcc tcaccaagga ctccatgaat atcaaagccc atatccacat
421 gttgctagag gggcttagag aactacaagg cctgcagaat ttcccagaga agcctcacca
481 ttgacttctt ccccccatcc tcagacatta aagagcctga atgcctttga aaaaaaaaaa
541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//