LOCUS BC008887 631 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 16, mRNA (cDNA clone
MGC:19652 IMAGE:3027807), complete cds.
ACCESSION BC008887
VERSION BC008887.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 631)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 631)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008887.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: a Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147359.
FEATURES Location/Qualifiers
source 1..631
/db_xref="H-InvDB:HIT000034054"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19652 IMAGE:3027807"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..631
/gene="C9orf16"
/gene_synonym="EST00098"
/gene_synonym="FLJ12823"
/gene_synonym="MGC4639"
/db_xref="GeneID:79095"
/db_xref="HGNC:HGNC:17823"
CDS 53..304
/gene="C9orf16"
/gene_synonym="EST00098"
/gene_synonym="FLJ12823"
/gene_synonym="MGC4639"
/codon_start=1
/product="chromosome 9 open reading frame 16"
/protein_id="AAH08887.1"
/db_xref="GeneID:79095"
/db_xref="HGNC:HGNC:17823"
/translation="MSGPNGDLGMPVEAGAEGEEDGFGEAEYAAINSMLDQINSCLDH
LEEKNDHLHARLQELLESNRQTRLEFQQQLGEAPSDASP"
BASE COUNT 120 a 237 c 179 g 95 t
ORIGIN
1 gacggtcgcc gcgttccatc gtcgcgcggc ccttcgggcg cccgagcccg caatgtcggg
61 ccccaacgga gacctgggga tgccggtgga ggcgggagcg gaaggcgagg aggacggctt
121 cggggaagca gaatacgctg ccatcaactc catgctggac cagatcaact cctgtctgga
181 ccacctggag gagaagaatg accacctcca cgcccgcctc caggagctgc tggagtccaa
241 ccggcagaca cgcctggagt tccagcagca gctcggggag gcccccagtg atgccagccc
301 ctaggctcca agagccccca accgggaccc aaccctgcct ccctgggcta ggctctggcc
361 tgggcactca ccccctggct tagacacctt ctcaagggct ggccttcagg gacccctggt
421 gggtctgcct gcctgggcca cccttcctgc ctgggcctcc ccttggccta cctgggccag
481 cccccaccac ctggcatgcc ctcctggggc caagagtggg cctgcaaccc acccacttgc
541 ctgcccaccc aactcctggg cgctccccac tctgcccagg ccttgagtgt ccacattaaa
601 tgggtctccc acaccaaaaa aaaaaaaaaa a
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