LOCUS BC008878 1765 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens chondroitin polymerizing factor, mRNA (cDNA clone IMAGE:4298587), partial cds. ACCESSION BC008878 VERSION BC008878.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1765) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1765) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC008878.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: m Column: 23. FEATURES Location/Qualifiers source 1..1765 /db_xref="H-InvDB:HIT000034045" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4298587" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1765 /gene="CHPF" /gene_synonym="CSS2" /gene_synonym="FLJ22678" /db_xref="GeneID:79586" CDS <1..1107 /gene="CHPF" /gene_synonym="CSS2" /gene_synonym="FLJ22678" /codon_start=1 /product="CHPF protein" /protein_id="AAH08878.2" /db_xref="GeneID:79586" /translation="GSPRCPLRGADRADVADVLGTALEELNRRYHPALRLQKQQLVNG YRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLT VLLPLAAAERDLAPGFLEAFATAALEPGDAAAALTLLLLYEPRQAQRVAHADVFAPVK AHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFL NRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGRFDRQAASEACFYNSD YVAARGRLAAASEQEEELLESLDVYELFLHFSSLHVLRAVEPALLQRYRAQTCSARLS EDLYHRCLQSVLEGLGSRTQLAMLLFEQEQGNST" misc_feature 7..1089 /gene="CHPF" /gene_synonym="CSS2" /gene_synonym="FLJ22678" /note="CHGN; Region: Chondroitin N-acetylgalactosaminyltransferase" /db_xref="CDD:pfam05679" BASE COUNT 324 a 601 c 516 g 324 t ORIGIN 1 ggctcacccc gctgcccact gcgtggggct gaccgggctg atgtggccga tgttctgggg 61 acagctctag aggagctgaa ccgccgctac cacccggcct tgcggctcca gaagcagcag 121 ctggtgaatg gctaccgacg ctttgatccg gcccggggta tggaatacac gctggacttg 181 cagctggagg cactgacccc ccagggaggc cgccggcccc tcactcgccg agtgcagctg 241 ctccggccgc tgagccgcgt ggagatcttg cctgtgccct atgtcactga ggcctcacgt 301 ctcactgtgc tgctgcctct agctgcggct gagcgtgacc tggcccctgg cttcttggag 361 gcctttgcca ctgcagcact ggagcctggt gatgctgcgg cagccctgac cctgctgcta 421 ctgtatgagc cgcgccaggc ccagcgcgtg gcccatgcag atgtcttcgc acctgtcaag 481 gcccacgtgg cagagctgga gcggcgtttc cccggtgccc gggtgccatg gctcagtgtg 541 cagacagccg caccctcacc actgcgcctc atggatctac tctccaagaa gcacccgctg 601 gacacactgt tcctgctggc cgggccagac acggtgctca cgcctgactt cctgaaccgc 661 tgccgcatgc atgccatctc cggctggcag gccttctttc ccatgcattt ccaagccttc 721 cacccagctg tggccccacc acaagggcct gggcccccag agctgggccg tgacactggc 781 cgctttgatc gccaggcagc cagcgaggcc tgcttctaca actccgacta cgtggcagcc 841 cgtgggcgcc tggcggcagc ctcagaacaa gaagaggagc tgctggagag cctggatgtg 901 tacgagctgt tcctccactt ctccagtctg catgtgctgc gggcggtgga gccggcgctg 961 ctgcagcgct accgggccca gacgtgcagc gcgaggctca gtgaggacct gtaccaccgc 1021 tgcctccaga gcgtgcttga gggcctcggc tcccgaaccc agctggccat gctactcttt 1081 gaacaggagc agggcaacag cacctgaccc caccctgtcc ccgtgggccg tggcatggcc 1141 acaccccacc ccacttctcc cccaaaacca gagccacctg ccagcctcgc tgggcagggc 1201 tggccgtagc cagaccccaa gctggcccac tggtcccctc tctggctctg tgggtccctg 1261 ggctctggac aagcactggg ggacgtgccc ccagagccac ccacttctca tcccaaaccc 1321 agtttccctg ccccctgacg ctgctgattc gggctgtggc ctccacgtat ttatgcagta 1381 cagtctgcct gacgccagcc ctgcctctgg gccctggggg ctgggctgta gaagagttgt 1441 tggggaagga gggagctgag gagggggcat ctcccaactt ctcccttttg gaccctgccg 1501 aagctccctg cctttaataa actggccaag tgtggacttg tgattcagag gttttgaaag 1561 ggtaggcagg cgtgggggag ggaggactgg ctgagcacca caggctcccc tgcccctgct 1621 ggggcctgcc tttcctttca cccgggacca agtcatgcat gtgcccagcc tcaccccggc 1681 ccccagtgcg tgcttggtca cacatacaca cagagaattc aaaaaaaaaa aaaaaaaaaa 1741 aaaaaaaaaa aaaaaaaaaa aaaaa //