LOCUS BC008877 1827 bp mRNA linear HUM 25-MAY-2004
DEFINITION Homo sapiens caspase recruitment domain family, member 9, mRNA
(cDNA clone MGC:14973 IMAGE:4139529), complete cds.
ACCESSION BC008877
VERSION BC008877.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1827)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1827)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008877.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16554557.
FEATURES Location/Qualifiers
source 1..1827
/db_xref="H-InvDB:HIT000034044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14973 IMAGE:4139529"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1827
/gene="CARD9"
/gene_synonym="hCARD9"
/db_xref="GeneID:64170"
/db_xref="MIM:607212"
CDS 142..1620
/gene="CARD9"
/gene_synonym="hCARD9"
/codon_start=1
/product="CARD9 protein"
/protein_id="AAH08877.1"
/db_xref="GeneID:64170"
/db_xref="MIM:607212"
/translation="MSDYENDDECWSVLEGFRVTLTSVIDPSRITPYLRQCKVLNPDD
EEQVLSDPNLVIRKRKVGVLLDILQRTGHKGYVAFLESLELYYPQLYKKVTGKEPARV
FSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSKDDFIKELRVKDSLLRKHQER
VQRLKEECEAGSRELKRCKEENYDLAMRLAHQSEEKGAALMRNRDLQLEIDQLKHSLM
KAEDDCKVERKHTLKLRHAMEQRPSQELLWELQQEKALLQARVQELEASVQEGKLDRS
SPYIQVLEEDWRQALRDHQEQANTIFSLRKDLRQGEARRLRCMEEKEMFELQCLALRK
DSKMYKDRIEAILLQMEEVAIERDQAIATREELHAQHARGLQEKDALRKQVRELGEKA
DELQLQVFQCEAQLLAVEGRLRRQQLETLVLSSDLEDGSPRRSQELSLPQDLEDTQLS
DKGCLAGGGSPKQPFAALHQEQVLRNPHDAGPAGLPGIGAVC"
BASE COUNT 421 a 543 c 594 g 269 t
ORIGIN
1 caggaagtgc acaggcgtcc ggcgtgctcc tccctccctg cagccccggg cagcatctcc
61 cagaggctcc gcggcccagg ctcctggtgt gtctgcagtg caggtggctc ctggaagacc
121 ctcagcctgc ctgctgaggc catgtcggac tacgagaacg atgacgagtg ctggagcgtc
181 ctggagggct tccgggtgac gctcacctcg gtcatcgacc cctcacgcat cacaccttac
241 ctgcggcagt gcaaggtcct gaaccccgat gatgaggagc aggtgctcag cgaccccaac
301 ctggtcatcc gcaaacggaa agtgggtgtg ctcctggaca tcctgcagcg gaccggccac
361 aagggctacg tggccttcct cgagagcctg gagctctact acccgcagct gtacaagaag
421 gtcacaggca aggagccggc ccgcgtcttc tccatgatca tcgacgcgtc cggggagtca
481 ggcctgactc agctgctgat gactgaggtc atgaagctgc agaagaaggt gcaggacctg
541 accgcgctgc tgagctccaa agatgacttc atcaaggagc tgcgggtgaa ggacagcctg
601 ctgcgcaagc accaggagcg tgtgcagagg ctcaaggagg agtgcgaggc cggcagccgc
661 gagctcaagc gctgcaagga ggagaactac gacctggcca tgcgcctggc gcaccagagt
721 gaggagaagg gcgccgcgct catgcggaac cgtgacctgc agctggagat tgaccagctc
781 aagcacagcc tcatgaaggc cgaggacgac tgcaaggtgg agcgcaagca cacgctgaag
841 ctcaggcacg ccatggagca gcggcccagc caggagctgc tgtgggagct gcagcaggag
901 aaggccctgc tccaggcccg ggtgcaggag ctggaggcct ccgtccagga ggggaagctg
961 gacaggagca gcccctacat ccaggtactg gaggaggact ggcggcaggc gctgcgggac
1021 caccaggagc aggccaacac catcttctcc ctgcgcaagg acctccgcca gggcgaggcc
1081 cgacgcctcc ggtgcatgga ggagaaggag atgttcgagc tgcagtgcct ggcactacgt
1141 aaggactcca agatgtacaa ggaccgcatc gaggccatcc tgctgcagat ggaggaggtc
1201 gccattgagc gggaccaggc catagccacg cgggaggagc tgcacgcaca gcacgcccgg
1261 ggcctgcagg agaaggacgc gctgcgcaag caggtgcggg agctgggcga gaaggcggat
1321 gagctgcagc tgcaggtgtt ccagtgtgag gcgcagctac tggccgtgga gggcaggctc
1381 aggcggcagc agctggagac gctcgtcctg agctccgacc tggaagatgg ctcacccagg
1441 aggtcccagg agctctcact cccccaggac ctggaggaca cccagctctc agacaaaggc
1501 tgccttgccg gcggggggag cccgaaacag ccctttgcag ctctgcacca ggagcaggtt
1561 ttgcggaacc cccatgacgc aggcccagcc ggactgccgg gcattggggc cgtttgttaa
1621 gcggcactca ttttgcggag gccatgcggg tgctcaccac ccccatgcac acgccatctg
1681 tgtaacttca ggatctgttc tgtttcacca tgtaacacac aatacatgca tgcattgtat
1741 tagtgttaga aaacacagct gcgtaaataa acagcacggg tgacccgcaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//