LOCUS BC008853 2309 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 13, mRNA (cDNA clone MGC:16573 IMAGE:4100291), complete cds. ACCESSION BC008853 VERSION BC008853.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2309) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2309) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC008853.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: a Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22748628. FEATURES Location/Qualifiers source 1..2309 /db_xref="H-InvDB:HIT000087163" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16573 IMAGE:4100291" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2309 /gene="SLC39A13" /gene_synonym="FLJ25785" /db_xref="GeneID:91252" CDS 43..1158 /gene="SLC39A13" /gene_synonym="FLJ25785" /codon_start=1 /product="SLC39A13 protein" /protein_id="AAH08853.2" /db_xref="GeneID:91252" /translation="MPGCPCPGCGMAGPRLLFLTALALELLGRAGGSQPALRSRGTAT ACRLDNKESESWGALLSGERLDTWICSLLGSLMVGLSGVFPLLVIPLEMGTMLRSEAG AWRLKQLLSFALGGLLGNVFLHLLPEAWAYTCSASPGGEGQSLQQQQQLGLWVIAGIL TFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNGGHCLAQPAAEPGLGAVVRSIKVSG YLNLLANTIDNFTHGLAVAASFLVSKKIGLLTTMAILLHEIPHEVGDFAILLRAGFDR WSAAKLQLSTALGGLLGAGFAICTQSPKGVVGCSPAAEETAAWVLPFTSGGFLYIALV NVLPDLLEEEDPWRSLQQLLLLCAGIVVMVLFSLFVD" misc_feature 301..1143 /gene="SLC39A13" /gene_synonym="FLJ25785" /note="Zip; Region: ZIP Zinc transporter. The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family" /db_xref="CDD:pfam02535" BASE COUNT 414 a 737 c 702 g 456 t ORIGIN 1 gggccgcccg gatcgccgcc gccgccgccg cacgtacgtg gcatgcctgg atgtccctgc 61 cctggctgtg gcatggcggg cccaaggctc ctcttcctca ctgcccttgc cctggagctc 121 ttgggaaggg ctgggggttc ccagccggcc ctccggagcc gggggactgc gacggcctgt 181 cgcctggaca acaaggaaag cgagtcctgg ggggctctgc tgagcggaga gcggctggac 241 acctggatct gctccctcct gggttccctc atggtggggc tcagtggggt cttcccgttg 301 cttgtcattc ccctagagat ggggaccatg ctgcgctcag aagctggggc ctggcgcctg 361 aagcagctgc tcagcttcgc cctgggggga ctcttgggca atgtgtttct gcatctgctg 421 cccgaagcct gggcctacac gtgcagcgcc agccctggtg gtgaggggca gagcctgcag 481 cagcagcaac agctggggct gtgggtcatt gctggcatcc tgaccttcct ggcgttggag 541 aagatgttcc tggacagcaa ggaggagggg accagccagg cccccaacaa agaccccact 601 gctgctgccg ccgcactcaa tggaggccac tgtctggccc agccggctgc agagcccggc 661 ctcggtgccg tggtccggag catcaaagtc agcggctacc tcaacctgct ggccaacacc 721 atcgataact tcacccacgg gctggctgtg gctgccagct tccttgtgag caagaagatc 781 gggctcctga caaccatggc catcctcctg catgagatcc cccatgaggt gggcgacttt 841 gccatcctgc tccgggccgg ctttgaccga tggagcgcag ccaagctgca actctcaaca 901 gcgctggggg gcctactggg cgctggcttc gccatctgta cccagtcccc caagggagta 961 gttgggtgtt ctcccgctgc agaggagacg gcagcctggg tcctgccctt cacctctggc 1021 ggctttctct acatcgcctt ggtgaacgtg ctccctgacc tcttggaaga agaggacccg 1081 tggcgctccc tgcagcagct gcttctgctc tgtgcgggca tcgtggtaat ggtgctgttc 1141 tcgctcttcg tggattaact ttccctgatg ccgacgcccc tgccccctgc agcaataaga 1201 tgctcggatt cactctgtga ccgcatatgt gagaggcaga gagggcgagt ggctgcgaga 1261 gagaatgagc ctcccgccag acaggaggga ggtgcgtgtg gatgtatgtg gtgtgcacat 1321 gtggccagag gtgtgtgcgc gagaccgaca ctgtgatccc tgtgctgggt ccggggccca 1381 gtgtagcgcc tgtccccagc catgctgtgg ttacctctcc ttgccgccct gtcaccttca 1441 cctcctggag taagcagcga ggaagagcag cactggtccc aagcagaggc cttgccctgc 1501 tgggaccccg ggagtgagag cagcccaagg atcccagggt gcagggaact ccagagctgc 1561 ccacctccca ctgccccctc agcacacaca cagtccccag gcggcctagg ggccaaggct 1621 ggggcggctt tggtcccttt tcctggccct tccttcccca cttctaagcc aaagaaagga 1681 gaggcaggtg ctcctgtacc ccagccccac tcagcactga cagtccccag ctcctagtag 1741 tgagctggga ggcgcttcct aagacccttt cctcagggct gccctgggag ctcattcctg 1801 gccaacacgc cctggcagca ccagcagctc ttgccacctc cagctgccaa acagcagcct 1861 gccgggcagg gagcagcccc aggccagaga ggcctcccgg tccagctcag ggatgctcct 1921 gccagcacag gggccaggga ctcctggagc aggcacatag tgagcccggg cagccctgcc 1981 cagctcaggc ccctttcctt ccccattgag gttggggtag gtgggggcgg tgagggctcc 2041 acgttgtcag cgctcaggaa tgtgctccgg cagagtgctg aagccataat ccccaaccat 2101 ttcccttggc tgacgcccag gtactcagct ggcccactcc acagccaggc ctggccctgc 2161 ccttcaccgt ggatgttttc agaagtggcc atcgagaggt ctggatggtt ttatagcaac 2221 tttgctgtga ttccgtttgt atctgtaaat atttgttcta tagataagat acaaataaat 2281 attatccaca taaaaaaaaa aaaaaaaaa //