LOCUS BC008833 2347 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 49, mRNA (cDNA clone
MGC:12612 IMAGE:4304656), complete cds.
ACCESSION BC008833
VERSION BC008833.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2347)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2347)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008833.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: p Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147582.
FEATURES Location/Qualifiers
source 1..2347
/db_xref="H-InvDB:HIT000034007"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12612 IMAGE:4304656"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2347
/gene="CCDC49"
/gene_synonym="FLJ20291"
/db_xref="GeneID:54883"
/db_xref="HGNC:HGNC:25989"
CDS 154..1431
/gene="CCDC49"
/gene_synonym="FLJ20291"
/codon_start=1
/product="coiled-coil domain containing 49"
/protein_id="AAH08833.1"
/db_xref="GeneID:54883"
/db_xref="HGNC:HGNC:25989"
/translation="MGGGDLNLKKSWHPQTLRNVEKVWKAEQKHEAERKKIEELQREL
REERAREEMQRYAEDVGAVKKKEEKLDWMYQGPGGMVNRDEYLLGRPIDKYVFEKMEE
KEAGCSSETGLLPGSIFAPSGANSLLDMASKIREDPLFIIRKKEEEKKREVLNNPVKM
KKIKELLQMSLEKKEKKKKKEKKKKHKKHKHRSSSSDRSSSEDEHSAGRSQKKMANSS
PVLSKVPGYGLQVRNSDRNQGLQGPLTAEQKRGHGMKNHSRSRSSSHSPPRHASKKST
REAGSRDRRSRSLGRRSRSPRPSKLHNSKVNRRETGQTRSPSPKKEVYQRRHAPGYTR
KLSAEELERKRQEMMENAKWREEERLNILKRHAKDEEREQRLEKLDSRDGKFIHRMKL
ESASTSSLEDRVKRNIYSLQRTSVALEKNFMKR"
BASE COUNT 712 a 497 c 615 g 523 t
ORIGIN
1 ccggaagtga cctctagagc ggtggtgaaa ctggcagttg acggctcctg ggactagatc
61 ccgcgaggta gcccccgaac tatttctcta cgttttctct tgatcctccc gaaatcttcc
121 agatccgcgt agtgaggaat cgtctccacc gtcatggggg gcggagacct gaatctgaag
181 aagagctggc acccgcagac cctcaggaat gtggagaaag tgtggaaggc cgagcagaag
241 catgaggctg agcggaagaa gattgaggag cttcagcggg agctgcgaga agagagagcc
301 cgggaagaga tgcagcgcta tgcggaggat gttggggccg tcaagaaaaa agaagaaaag
361 ttggactgga tgtaccaggg tcctggtggg atggtgaacc gtgacgagta cctgctgggg
421 cgccccattg acaaatatgt ttttgagaag atggaggaga aggaggcagg ctgctcttct
481 gaaacaggac ttctcccagg ctctatcttt gccccatcag gtgccaattc ccttcttgac
541 atggccagca agatccggga ggacccactc ttcatcatca ggaagaagga ggaggagaaa
601 aaacgagagg tattaaataa tccagtgaaa atgaagaaaa tcaaagaatt gttgcaaatg
661 agtctggaaa aaaaggagaa gaagaaaaag aaggagaaga aaaagaagca caagaaacat
721 aagcacagaa gctcgagtag tgatcgttcc agcagcgagg atgagcacag tgcagggaga
781 tcacagaaga agatggcaaa ttcctcccct gttttgtcca aagtccctgg atatggctta
841 caggtccgga actctgaccg taaccagggt cttcagggtc ctctgacagc agagcaaaag
901 agagggcatg ggatgaagaa ccattccaga tccagaagct cctcccactc acccccaaga
961 catgccagca agaagagcac cagggaagca gggtcccggg acaggaggtc tcgatccctg
1021 ggcagaaggt cacggtcccc aagacccagc aaactgcaca actctaaggt gaacaggaga
1081 gagacaggcc aaactaggag cccatcacct aaaaaagagg tctaccaaag gcgacatgct
1141 cccggataca ccagaaaact ctctgcagag gaattagagc gaaaacggca agagatgatg
1201 gaaaacgcca aatggaggga ggaggagaga ctgaacatcc tcaagaggca tgctaaggat
1261 gaggaacggg agcagaggct agagaagctg gactcccggg atgggaagtt catccaccgc
1321 atgaagctgg agagtgcatc tacttcctcc ctggaggatc gggtgaagcg gaatatctac
1381 tctttacaga gaacttcggt agctctggag aagaacttta tgaaaagatg aaaactgtcc
1441 cctctcttat tggttttcct gcattttcca gggaagctgc tgacccctta attctcttta
1501 taagagttca aatgacttct ttcacagatg tcaaaccacc agtgttcaaa gtgaccctgc
1561 ttcattgagt cctgaaacag ctcacttcct ttgagagcta gtgtgacttg ctttgtggga
1621 cactcagtaa ctttgggttt tgactcttta acgggtgggc actggaccat ctcggtggga
1681 gtgcttgtgc cactctggaa ggctgttccc tggggttgtg atgtttatca tgccacttcc
1741 ttcttacctg tgccaacaga cctatttcac tgcctcagcg tacaccagac ccttcagaaa
1801 cctctctggt gtcacccaga tagattgtgc ttactgagac aaatgaacgt ttacttgatt
1861 tagaagataa tgtgacagaa tgatgtcagg ttaggtcaaa gccaagggag tgacagaatc
1921 tggaaaatca aacaatacaa aaagccctaa atgaactgtt aactatttga tctttggatg
1981 taaaattgta atgcgtatat gtacaaatgt acaattttta catgctttta aaaaaggtta
2041 gctttgtgaa aataccttgt ttggtcaatg actttactgg gtaatagaac cacattgaac
2101 cttgatggca agtaatacaa taaggcaggc cagctcgttt ttctctctga atctggctgg
2161 tttaggagga gcctgggttt atcgacgaga tctggagtat ctattctttt ccactgcttg
2221 cagtctccaa tgtaggcagt gtaaaggtat agtaaaatga ttttaggagt cagaaccaaa
2281 ttgccaatat gctccatggc tcctaaagga aaataaaatg gaagttttta aaaaaaaaaa
2341 aaaaaaa
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