LOCUS BC008806 2535 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens microtubule-associated protein 1S, mRNA (cDNA clone
IMAGE:3945773), partial cds.
ACCESSION BC008806
VERSION BC008806.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2535)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2535)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC008806.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: j Column: 3.
FEATURES Location/Qualifiers
source 1..2535
/db_xref="H-InvDB:HIT000033985"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3945773"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2535
/gene="MAP1S"
/gene_synonym="FLJ10669"
/gene_synonym="MAP8"
/gene_synonym="VCY2IP-1"
/db_xref="GeneID:55201"
/db_xref="HGNC:HGNC:15715"
/db_xref="MIM:607573"
CDS <1..2423
/gene="MAP1S"
/gene_synonym="FLJ10669"
/gene_synonym="MAP8"
/gene_synonym="VCY2IP-1"
/codon_start=3
/product="MAP1S protein"
/protein_id="AAH08806.2"
/db_xref="GeneID:55201"
/db_xref="HGNC:HGNC:15715"
/db_xref="MIM:607573"
/translation="AFFAVNGFTVLVNGGSNPKSSFWKLVRHLDRVDAVLVTHPGADS
LPGLNSLLRRKLAERSEVAAGGGSWDDRLRRLISPNLGVVFFNACEAASRLARGEDEA
ELALSLLAQLGITPLPLSRGPVPAKPTVLFEKMGVGRLDMYVLHPPSAGAERTLASVC
ALLVWHPAGPGEKVVRVLFPGCTPPACLLDGLVRLQHLRFLREPVVTPQDLEGPGRAE
SKESVGSRDSSKREGLLATHPRPGQERPGVARKEPARAEAPRKTEKEAKTPRELKKDP
KPSVSRTQPREVRRAASSVPNLKKTNAQAAPKPRKAPSTSHSGFPPVANGPRSPPSLR
CGEASPPSAACGSPASQLVATPSLELGPIPAGEEKALELPLAASSIPRPRTPSPESHR
SPAEGSERLSLSPLRGGEAGPDASPTVTTPTVTTPSLPAEVGSPHSTEVDESLSVSFE
QVLPPSAPTSEAGLSLPLRGPRARRSASPHDVDLCLVSPCEFEHRKAVPMAPAPASPG
SSNDSSARSQERAGGLGAEETPPTSVSESLPTLSDSDPVPLAPGAADSDEDTEGFGVP
RHDPLPDPLKVPPPLPDPSSICMVDPEMLPPKTARQTENVSRTRKPLARPNSRAAAPK
ATPVAAAKTKGLAGGDRASRPLSARSEPSEKGGRAPLSRKSSTPKTATRGPSGSASSR
PGVSATPPKSPVYLDLAYLPSGSSAHLVDEEFFQRVRALCYVISGQDQRKEEGMRAVL
DALLASKQHWDRDLQVTLIPTFDSVAMHTWYAETHARHQALGITVLGSNSMVSMQDDA
FPACKVEF"
BASE COUNT 456 a 932 c 794 g 353 t
ORIGIN
1 ccgccttctt cgccgtcaat ggcttcactg tgctggtcaa cggtggctca aaccccaagt
61 ccagtttctg gaagctggtg cggcacctgg accgcgtgga tgccgtgctg gtgacccacc
121 ctggcgccga cagcctcccc ggcctcaaca gcctgctgcg gcgcaaactg gcggagcgct
181 ccgaggtggc tgctggtggg ggctcctggg acgacaggct gcgcaggctc atctccccca
241 acctgggggt cgtgttcttc aacgcctgcg aggccgcgtc gcggctggcg cgcggcgagg
301 atgaggcgga gctggcgctg agcctcctgg cgcagctggg catcacgcct ctgccactca
361 gccgcggccc cgtgccagcc aaacccaccg tgctcttcga gaagatgggc gtgggccggc
421 tggacatgta tgtgctgcac ccgccctccg ccggcgccga gcgcacgctg gcctctgtgt
481 gcgccctgct ggtgtggcac cccgccggcc ccggcgagaa ggtggtgcgc gtgctgttcc
541 ccggttgcac cccgcccgcc tgcctcctgg acggcctggt ccgcctgcag cacttgaggt
601 tcctgcgaga gcccgtggtg acgccccagg acctggaggg gccggggcga gccgagagca
661 aagagagcgt gggctcccgg gacagctcga agagagaggg cctcctggcc acccacccta
721 gacctggcca ggagcgccct ggggtggccc gcaaggagcc agcacgggct gaggccccac
781 gcaagactga gaaagaagcc aagacccccc gggagttgaa gaaagacccc aaaccgagtg
841 tctcccggac ccagccgcgg gaggtgcgcc gggcagcctc ttctgtgccc aacctcaaga
901 agacgaatgc ccaggcggca cccaagcccc gcaaagcgcc cagcacgtcc cactctggct
961 tcccgccggt ggcaaatgga ccccgcagcc cgcccagcct ccgatgtgga gaagccagcc
1021 cccccagtgc agcctgcggc tctccggcct cccagctggt ggccacgccc agcctggagc
1081 tggggccgat cccagccggg gaggagaagg cactggagct gcctttggcc gccagctcaa
1141 tcccaaggcc acgcacaccc tcccctgagt cccaccggag ccccgcagag ggcagcgagc
1201 ggctgtcgct gagcccactg cggggcgggg aggccgggcc agacgcctca cccacagtga
1261 ccacacccac ggtgaccacg ccctcactac ccgcagaggt gggctccccg cactcgaccg
1321 aggtggacga gtccctgtcg gtgtcctttg agcaggtgct gccgccatcc gcccccacca
1381 gtgaggctgg gctgagcctc ccgctgcgtg gcccccgggc gcggcgctcg gcttccccac
1441 acgatgtgga cctgtgcctg gtgtcaccct gtgaatttga gcatcgcaag gcggtgccaa
1501 tggcaccggc acctgcgtcc cccggcagct cgaatgacag cagtgcccgg tcacaggaac
1561 gggcaggtgg gctgggggcc gaggagacgc cacccacatc ggtcagcgag tccctgccca
1621 ccctgtctga ctcggatccc gtgcccctgg cccccggtgc ggcagactca gacgaagaca
1681 cagagggctt tggagtccct cgccacgacc ctttgcctga ccccctcaag gtccccccac
1741 cactgcctga cccatccagc atctgcatgg tggaccccga gatgctgccc cccaagacag
1801 cacggcaaac ggagaacgtc agccgcaccc ggaagcccct ggcccgcccc aactcacgcg
1861 ctgccgcccc caaagccact ccagtggctg ctgccaaaac caaggggctt gctggtgggg
1921 accgtgccag ccgaccactc agtgcccgga gtgagcccag tgagaaggga ggccgggcac
1981 ccctgtccag aaagtcctca acccccaaga ctgccactcg aggcccgtcg gggtcagcca
2041 gcagccggcc cggggtgtca gccaccccac ccaagtcccc ggtctacctg gacctggcct
2101 acctgcccag cgggagcagc gcccacctgg tggatgagga gttcttccag cgcgtgcgcg
2161 cgctctgcta cgtcatcagt ggccaggacc agcgcaagga ggaaggcatg cgggccgtcc
2221 tggacgcgct actggccagc aagcagcatt gggaccgtga cctgcaggtg accctgatcc
2281 ccactttcga ctcggtggcc atgcatacgt ggtacgcaga gacgcacgcc cggcaccagg
2341 cgctgggcat cacggtgttg ggcagcaaca gcatggtgtc catgcaggat gacgccttcc
2401 cggcttgcaa ggtggagttc tagccccatc gccgacacgc cccccactca gcccagcccg
2461 cctgtcccta gattcagcca catcagaaat aaactgtgac tacacttgaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaa
//