LOCUS BC008796 1043 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 85B, mRNA (cDNA clone
MGC:3521 IMAGE:3617697), complete cds.
ACCESSION BC008796
VERSION BC008796.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1043)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1043)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008796.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: p Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46094078.
FEATURES Location/Qualifiers
source 1..1043
/db_xref="H-InvDB:HIT000033976"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3521 IMAGE:3617697"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1043
/gene="CCDC85B"
/gene_synonym="DIPA"
/db_xref="GeneID:11007"
/db_xref="HGNC:HGNC:24926"
/db_xref="MIM:605360"
CDS 146..754
/gene="CCDC85B"
/gene_synonym="DIPA"
/codon_start=1
/product="coiled-coil domain containing 85B"
/protein_id="AAH08796.1"
/db_xref="GeneID:11007"
/db_xref="HGNC:HGNC:24926"
/db_xref="MIM:605360"
/translation="MEAEAGGLEELTDEEMAALGKEELVRRLRREEAARLAALVQRGR
LMQEVNRQLQGHLGEIRELKQLNRRLQAENRELRDLCCFLDSERQRGRRAARQWQLFG
TQASRAVREDLGGCWQKLAELEGRQEELLRENLALKELCLALGEEWGPRGGPSGAGGS
GAGPAPELALPPCGPRDLGDGSSSTGSVGSPDQLPLACSPDD"
BASE COUNT 200 a 322 c 394 g 127 t
ORIGIN
1 cccgggtagc tgctgcagcc tacgctgcct cggccactgc ctgccgcgtg cggagccgga
61 gcccgagcct gagtggcgcc gggcccgacg tggggctcct gggccgcggc ggcgggcggg
121 cgatgctcca gaggcctgac cagccatgga ggccgaggca ggcggcctgg aggagctgac
181 ggacgaggag atggcggcgc taggcaagga agagctagtg cggcgcctgc ggcgggagga
241 ggcggcgcgc ctggcggcac tggtgcagcg cggccgcctc atgcaggagg tgaatcggca
301 gctgcagggc cacctgggcg agatccgcga gctcaagcag ctcaaccggc gtctgcaggc
361 agagaaccgt gagctgcgcg acctctgctg cttcctggac tcggagcgcc agcgcgggcg
421 gcgcgccgca cgccagtggc agctcttcgg gacccaagca tcccgggccg tgcgcgagga
481 cctgggcggc tgttggcaga agctggccga gctggagggc cgccaggagg agctgctgcg
541 ggagaaccta gcgcttaagg agctctgcct ggcgctgggc gaagaatggg gcccccgcgg
601 cggccccagc ggcgccgggg gatcaggagc cgggccagca cccgagcttg ccttgccccc
661 gtgcgggccc cgcgacctag gcgatggaag ctccagcact ggcagcgtgg gcagtccgga
721 tcagttgccc ctggcctgtt cccccgatga ttgaaggcac tgcttcctcc acgccgacgc
781 ccgcccggat tgctccccga gccccgggac cgctgtggac ctcgggacct ggacgccgtc
841 ctggctgcgc aggaggggcc gctggcatgg actaagaaat cctgacacca agaagggccc
901 ctcgctcttg ctggcagggc agcaggggga ctgaaggctg gagcggaggg acttgctggg
961 ggttggattg ggggtaataa acccggacgg aagcggaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aac
//