LOCUS BC008788 1979 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens chromosome 1 open reading frame 159, mRNA (cDNA clone
MGC:3446 IMAGE:3627081), complete cds.
ACCESSION BC008788
VERSION BC008788.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1979)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1979)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008788.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254912
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1979
/db_xref="H-InvDB:HIT000033968"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3446 IMAGE:3627081"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1979
/gene="C1orf159"
/gene_synonym="RP11-465B22.4"
/db_xref="GeneID:54991"
/db_xref="HGNC:HGNC:26062"
CDS 109..666
/gene="C1orf159"
/gene_synonym="RP11-465B22.4"
/codon_start=1
/product="C1orf159 protein"
/protein_id="AAH08788.1"
/db_xref="GeneID:54991"
/db_xref="HGNC:HGNC:26062"
/translation="MALRHLALLAGLLVGVASKSMENTAQLPECCVDVVGVNASCPGA
SLCGPGCYRRWNADGSASCVRCGNGTLPAYNGSECRSFAGPGAPFPMNRSSGTPGRPH
PGAPRVAASLFLGTFFISSGLILSVAGFFYLKRSSKLPRACYRRNKGPAPAGSLPGRW
SSQQFGPQAPALQPGEAVSNPHHPG"
BASE COUNT 375 a 691 c 586 g 327 t
ORIGIN
1 ctgagcccat gagctcccag agctaacccc tgaacaccca ggcgggcaaa gggctgatgt
61 cggtagtccc catcctggag gggcaggctc tgcgcatctg ctcctggcat ggcgctgcgg
121 cacctcgccc tcctggctgg ccttctcgtg ggagtcgcca gcaagtccat ggagaacacg
181 gcccagctgc ccgagtgctg tgtggatgtg gtgggcgtca acgccagctg cccaggcgca
241 agtctgtgtg gtccaggctg ttacaggcgc tggaacgcgg acgggagcgc cagctgcgtc
301 cgctgtggga acggaaccct cccagcctac aacggctccg agtgtagaag ctttgctggc
361 ccgggtgcgc cattccccat gaacagaagc tcagggaccc ccgggcggcc acatcctggg
421 gctccgcgcg tggccgcctc cctcttcctg ggcacgttct tcatcagctc cggcctcatc
481 ctctccgtag ctgggttctt ctacctcaag cgctccagta aactccccag ggcctgctac
541 agaagaaaca aagggccggc ccccgcaggg tccctgccag gcagatggtc cagccagcag
601 ttcggacccc aagctccggc cctgcagcct ggcgaagccg taagtaaccc acatcatccg
661 ggctgagcgt ccctggccgc gtgtgcctgt gccaggccat cccgagtcct cactctgcct
721 ttctctcctt ttcaaggctg caatgatccc cccgccacag tcctcagtac ggaagccgcg
781 ctacgtcagg cgggagcggc ccctggacag ggccacggat cccgctgcct tcccggggga
841 ggcccgtatc agcaatgtct gacctggagg ccgagaccac gccacgcact tggcggcagg
901 gacccggagg ccgacccctt ggtgggaacc agcacaaagt gttggcatcg cccggcgccc
961 gggacagtcc tgggcacagc ctcggctctg agtccctccg cctcccagcg acggacgcca
1021 aagggtcccg ggccgcctga ggctcctccc caccacagcc atctcgttta tcggaccagc
1081 agcaggcatc catgagacct cagagcttca gatcgaggcc ttggggggtc cgggcccccc
1141 caggaaacac ggtgaggccc cagcgcctgc agccaaagct ggcacgatct atggggcagg
1201 tgccgctctg cctagaaaag ccaggggctc tgctgccgtg ccctccagag cccacagcgg
1261 gcaggactcc tccagcacca ccacacccag tggcccgaga cccctctgag aacagtgagg
1321 ctggtcctcg tgccgttcca gccggtgccc ggccagtggg gaggacacag cctaggaacc
1381 agctgcctga gaccagggtg cctctgggct gtcctcccgc gtggcggaga ccccaagcac
1441 gcagccaccc atttccggag ctgcaggata gagcttcctc ttgatctctg tttttaagca
1501 gaaattcatt gtgcagaaaa gtcctccaga gctctgtggc cccgctcgga tccgctggac
1561 ccccatgcct ggctgatccc tgcccacgtg gggcaggccc acatctaacc cccacaagtc
1621 actgcctcac tgcacctgcc aaggctgccc tggcgctgag tcctggggtc cctcccggag
1681 ttcctgggag aaaggcgccg tcgtggccgc ctcccgcacg ccaggcccgg gctccaccgt
1741 gggtctcaga cgccctgcgg caccggcacc gtctgcttta gcatgggacc cccatctgag
1801 gggtggcctg gccttcgggg tccccacgct cctttgcgaa gtccactgtg ggtgccatca
1861 tggtctccgg gacctgggcc agcgggaacg tgggggcact gggtgtgctg atataaagtc
1921 ggcattactc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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