LOCUS BC008761 2518 bp mRNA linear HUM 04-NOV-2003 DEFINITION Homo sapiens latent transforming growth factor beta binding protein 3, mRNA (cDNA clone IMAGE:3349420), partial cds. ACCESSION BC008761 VERSION BC008761.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2518) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2518) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 28, 2003 this sequence version replaced BC008761.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: f Column: 12. FEATURES Location/Qualifiers source 1..2518 /db_xref="H-InvDB:HIT000087151" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3349420" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2518 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /db_xref="GeneID:4054" /db_xref="MIM:602090" CDS <1..2233 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /codon_start=2 /product="LTBP3 protein" /protein_id="AAH08761.2" /db_xref="GeneID:4054" /db_xref="MIM:602090" /translation="TDSPVSEERSVQQSHPTATTTPARPYPELISRPSPPTMRWFLPD LPPSRSAVEIAPTQVTETDECRLNQNICGHGECVPGPPDYSCHCNPGYRSHPQHRYCV DVNECEAEPCGPGRGICMNTGGSYNCHCNRGYRLHVGAGGRSCVDLNECAKPHLCGDG GFCINFPGHYKCNCYPGYRLKASRPPVCEDIDECRDPSSCPDGKCENKPGSFKCIACQ PGYRSQGGGACRDVNECAEGSPCSPGWCENLPGSFRCTCAQGYAPAPDGRSCLDVDEC EAGDVCDNGICSNTPGSFQCQCLSGYHLSRDRSHCEDIDECDFPAACIGGDCINTNGS YRCLCPQGHRLVGGRKCQDIDECSQDPSLCLPHGACKNLQGSYVCVCDEGFTPTQDQH GCEEVEQPHHKKECYLNFDDTVFCDSVLATNVTQQECCCSLGAGWGDHCEIYPCPVYS SAEFHSLCPDGKGYTQDNNIVNYGIPAHRDIDECMLFGSEICKEGKCVNTQPGYECYC KQGFYYDGNLLECVDVDECLDESNCRNGVCENTRGGYRCACTPPAEYSPAQRQCLSPE EMERAPERRDVCWSQRGEDGMCAGPLAGPALTFDDCCCRQGRGWGAQCRPCPPRGAGS HCPTSQSESNSFWDTSPLLLGKPPRDEDSSEEDSDECRCVSGRCVPRPGGAVCECPGG FQLDASRARCVDIDECRELNQRGLLCKSERCVNTSGSFRCVCKAGFARSRPHGACVPQ RRR" misc_feature 440..544 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /note="EGF_CA; Region: Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains" /db_xref="CDD:cd00054" misc_feature 569..676 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /note="EGF_CA; Region: Calcium-binding EGF-like domain" /db_xref="CDD:smart00179" misc_feature 692..784 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /note="EGF_CA; Region: Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains" /db_xref="CDD:cd00054" misc_feature 815..919 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /note="EGF_CA; Region: Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains" /db_xref="CDD:cd00054" misc_feature 1247..1372 /gene="LTBP3" /gene_synonym="DKFZP586M2123" /gene_synonym="LTBP2" /note="TB; Region: TB domain. This domain is also known as the 8 cysteine domain. This family includes the hybrid domains. This cysteine rich repeat is found in TGF binding protein and fibrillin" /db_xref="CDD:pfam00683" BASE COUNT 461 a 849 c 793 g 415 t ORIGIN 1 cacggactca ccggtgagtg aggagaggtc agtgcagcag agccacccaa ctgccaccac 61 gactcctgcc cggccctacc ccgagctgat ctcccgtccc tcgcccccga ccatgcgctg 121 gttcctgccg gacttgcctc cttcccgcag cgccgtagag atcgctccca ctcaggtcac 181 agagactgat gagtgccgac tgaaccagaa catctgtggc cacggagagt gcgtgccggg 241 cccccctgac tactcctgcc actgcaaccc cggctaccgg tcacatcccc agcaccgcta 301 ctgcgtggat gtgaacgagt gcgaggcaga gccctgtggc ccggggaggg gcatctgcat 361 gaacaccggc ggctcctaca attgccactg caaccgcggc taccgcctgc acgtgggcgc 421 cggggggcgc tcgtgcgtgg acctgaacga atgcgccaag ccccacctgt gcggcgacgg 481 cggcttctgc atcaactttc ccggtcacta caagtgcaac tgctaccccg gctaccggct 541 caaagcctcc cggcctcctg tgtgcgaaga catcgacgag tgccgggacc caagctcttg 601 cccggatggc aaatgcgaga acaagcccgg gagcttcaag tgcatcgcct gtcagcctgg 661 ctaccgcagc caggggggcg gggcctgtcg cgacgtgaac gagtgcgccg agggcagccc 721 ctgctcgcct ggctggtgcg agaacctccc gggctccttc cgctgcacct gtgcccaggg 781 ctacgcgccc gcgcccgacg gccgcagttg cttggatgtg gacgagtgtg aggctgggga 841 cgtgtgtgac aatggcatct gcagcaacac gccaggatct ttccagtgtc agtgcctctc 901 tggctaccat ctgtccaggg accggagcca ctgcgaggac attgatgagt gtgacttccc 961 tgcagcctgc attgggggtg actgcatcaa taccaatggc tcctacagat gtctttgccc 1021 ccaggggcat cggctggtgg gtggcaggaa atgccaagac atagatgagt gcagccagga 1081 cccgagcctg tgccttcccc atggggcctg caagaacctt cagggctcct atgtgtgtgt 1141 ctgcgatgag ggcttcactc ccacccagga ccagcacggt tgtgaggagg tggagcagcc 1201 ccaccacaag aaggagtgct acctgaactt cgatgacaca gtgttctgcg acagcgtatt 1261 ggccaccaac gtgacccagc aggagtgctg ctgctctctg ggggccggct ggggcgacca 1321 ctgcgaaatc tacccctgcc cagtctacag ctcagccgag ttccacagcc tctgcccaga 1381 cggaaagggc tacacccagg acaacaacat cgtcaactac ggcatcccag cccaccgtga 1441 catcgacgag tgcatgttgt tcgggtcgga gatttgcaag gagggcaagt gcgtgaacac 1501 gcagcctggc tacgagtgct actgcaagca gggcttctac tacgacggga acctgctgga 1561 atgcgtggac gtggacgagt gcctggacga gtccaactgc cggaacggag tgtgtgagaa 1621 cacgcgcggc ggctaccgct gtgcctgcac gccccctgcc gagtacagtc ccgcgcagcg 1681 ccagtgcctg agcccggaag agatggagcg tgccccggag cggcgcgacg tgtgctggag 1741 ccagcgcgga gaggacggca tgtgcgctgg ccccctggcc gggcctgccc tcaccttcga 1801 cgactgctgc tgccgccagg gccgcggctg gggcgcccaa tgccgaccgt gcccgccgcg 1861 cggcgcgggg tcccattgcc cgacatcgca gagcgagagc aattccttct gggacacaag 1921 ccccctgctg ttggggaagc ccccaagaga tgaggacagt tcagaggagg attcagacga 1981 gtgtcgctgc gtgagtggcc gctgcgtgcc gcggccgggc ggcgccgtgt gcgagtgtcc 2041 cggcggcttc cagctcgacg cctcccgcgc ccgctgcgtg gatatcgacg agtgccgaga 2101 gctgaaccag cgcgggctgc tgtgcaagag cgagcgctgc gtgaacacca gcggctcctt 2161 ccgctgcgtc tgcaaagccg gcttcgcgcg cagccgcccg cacggggcct gcgttcccca 2221 gcgccgccgc tgacgccgcc gacgccgccc tcggcccaga cctcggtgat cactgaggga 2281 tttccgcgag ctcggcctca cttctgcccc gacttgtggc tcggacccag ggaccttcag 2341 ggcccgcaga ccctcccggc gccttgagac ccgaggcgcc cctaccggcc cccctccccg 2401 gttagcgggc ggttgtaagg tctccggcgg gcgctgcctg ccttcctccc agagggtgtt 2461 tcctagaaac tgataaatca gatcgtgcct ttttaaaaaa aaaaaaaaaa aaaaaaaa //