LOCUS       BC008741                3211 bp    mRNA    linear   HUM 18-JAN-2005
DEFINITION  Homo sapiens PDZ and LIM domain 5, mRNA (cDNA clone MGC:2010
            IMAGE:3345715), complete cds.
ACCESSION   BC008741
VERSION     BC008741.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3211)
  AUTHORS   Director MGC Project.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC008741.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 5 Row: c Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5453713.
FEATURES             Location/Qualifiers
     source          1..3211
                     /db_xref="H-InvDB:HIT000033936"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:2010 IMAGE:3345715"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_20"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..3211
                     /gene="PDLIM5"
                     /gene_synonym="1110001A05Rik"
                     /gene_synonym="ENH"
                     /gene_synonym="L9"
                     /gene_synonym="LIM"
                     /gene_synonym="PRO2489"
                     /db_xref="GeneID:10611"
                     /db_xref="MIM:605904"
     CDS             121..1911
                     /gene="PDLIM5"
                     /gene_synonym="1110001A05Rik"
                     /gene_synonym="ENH"
                     /gene_synonym="L9"
                     /gene_synonym="LIM"
                     /gene_synonym="PRO2489"
                     /codon_start=1
                     /product="PDLIM5 protein"
                     /protein_id="AAH08741.1"
                     /db_xref="GeneID:10611"
                     /db_xref="MIM:605904"
                     /translation="MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANV
                     RIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKE
                     VVKPVPITSPAVSKVTSTNNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSH
                     ASPSPVAAVTPPLFAASGLHANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQ
                     ELAEGQRRGSQGDSKQQNGPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTG
                     TTQSRSFRILAQITGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPT
                     SGRPGVTSLTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSA
                     LGQTQPSDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCK
                     NTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVAC
                     GKPIRNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVC
                     SVCCESLEGQTFFSKKDKPLCKKHAHSVNF"
BASE COUNT          944 a          720 c          709 g          838 t
ORIGIN      
        1 gggacggcgc cctcaccgcg agtcacttgt cagcccttgt ctgaggcgga ggcagccccg
       61 cgccgcgccg gacccgagca tatttcattt tctgtcattg gactttgagc cattagaacc
      121 atgagcaact acagtgtgtc actggttggc ccagctcctt ggggtttccg gctgcagggc
      181 ggtaaggatt tcaacatgcc tctgacaatc tctagtctaa aagatggcgg caaggcagcc
      241 caggcaaatg taagaatagg cgatgtggtt ctcagcattg atggaataaa tgcacaagga
      301 atgactcatc ttgaagccca gaataagatt aagggttgta caggctcttt gaatatgact
      361 ctgcaaagag catctgctgc acccaagcct gagccggttc ctgttcaaaa gggagaacct
      421 aaagaagtag ttaaacctgt gcccattaca tctcctgctg tgtccaaagt cacttccaca
      481 aacaacatgg cctacaataa ggcaccacgg ccttttggtt ctgtgtcttc accaaaagtc
      541 acatccatcc catcaccatc gtctgccttc accccagccc atgcgaccac ctcatcacat
      601 gcttcccctt cacccgtggc tgccgtcact cctcccctgt tcgctgcatc tggactgcat
      661 gctaatgcca atcttagtgc tgaccagtct ccatctgcac tgagcgctgg taaaactgca
      721 gttaatgtcc cacggcagcc cacagtcacc agcgtgtgtt ccgagacttc tcaggagcta
      781 gcagagggac agagaagagg atcccagggt gacagtaaac agcaaaatgg cccaccaaga
      841 aaacacattg tggagcgcta tacagagttt tatcatgtac ccactcacag tgatgccagc
      901 aagaagagac tgattgagga tactgaagac tggcgtccaa ggactggaac aactcagtct
      961 cgctctttcc gaatccttgc ccagatcact gggactgaac atttgaaaga atctgaagcc
     1021 gataatacaa agaaggcaaa taactctcag gagccttctc cgcagttggc ttcctcggta
     1081 gcttccacac ggagcatgcc cgagagcctg gacagcccaa cctctggcag accaggggtt
     1141 accagcctca caactgcagc tgccttcaag cctgtaggat ccactggcgt catcaagtca
     1201 ccaagctggc aacggccaaa ccaaggagta ccttccactg gaagaatctc aaacagcgct
     1261 gcttactcag gatcagtggc accagccaac tcagctttgg gacaaaccca gccaagtgac
     1321 caggacactt tagtgcaaag agctgagcac attccagcag ggaaacgaac tccgatgtgc
     1381 gcccattgta accaggtcat cagaggacca ttcttagtgg cactggggaa atcttggcac
     1441 ccagaagaat tcaactgcgc tcactgcaaa aatacaatgg cctacattgg atttgtagag
     1501 gagaaaggag ccctgtattg tgagctgtgc tatgagaaat tctttgcccc tgaatgtggt
     1561 cgatgccaaa ggaagatcct tggagaagtc atcaatgcgt tgaaacaaac ttggcatgtt
     1621 tcctgttttg tgtgtgtagc ctgtggaaag cccattcgga acaatgtttt tcacttggag
     1681 gatggtgaac cctactgtga gactgattat tatgccctct ttggtactat atgccatgga
     1741 tgtgaatttc ccatagaagc tggtgacatg ttcctggaag ctctgggcta cacctggcat
     1801 gacacttgct ttgtatgctc agtgtgttgt gaaagtttgg aaggtcagac ctttttctcc
     1861 aagaaggaca agcccctgtg taagaaacat gctcattctg tgaatttttg aaagtcaaca
     1921 gttcaggaga agagaaggaa tttgaagaga aaaaggaaaa ttaaaattac taattaattt
     1981 ttagattcaa tatttatatg gagttttgaa aaataatagt ggccctgaag gaataaattc
     2041 cagctttaaa aaccaagtct gaggaaatat ttggcttcat aaagtaaaga gacggtttgg
     2101 catttattat tactttttcc tgtattttat gcccataaaa taagctttat aaaaaccaat
     2161 ttcctgatgg actattaaat tcatcttaga ataaattagt gaagaattta attttagaat
     2221 aaataatcca atctgaaata attatacctt ctttccttgt taggtagtta tgagtaaatc
     2281 tgcaaaaggc aatgaaaatg ccttaaattt tatcaataac agaattattg tatttaaaaa
     2341 aaaactaata cttatcttta aaatagtaaa taggatttta aacagagaat tttatcagta
     2401 ataggtgtca gtttttaaaa aattgcttgt aggctgagcg cggtggctca cgcctgtaat
     2461 cccagctact caagaggctg aggcacgaga atcacttgaa cccgggaggg agaggttgca
     2521 gtgagccaag atcgtaccac tgcactccag cctgggtgac agagtgagac tctgtctcca
     2581 aaaaaaaact ttgcttgtat attatttttg ccttacagtg gatcattcta gtaggaaagg
     2641 acaataagat tttttatcaa aatgtgtcat gccagtaaga gatgttatat tcttttctca
     2701 tttcttcccc acccaaaaat aagctaccat atagcttata agtctcaaat ttttgccttt
     2761 tactaaaatg tgattgtttc tattcattgt gtatgcttca tcacctatat taggcaaatt
     2821 ccattttttt cccttgtgct aaggtaaaga tttaattaaa taattttggc ctctcatagt
     2881 tttctctctc tttaaagaga ataaatagag ggccaggtgt ggtggctcac gcctgtgatc
     2941 ccagcacttt gggaggccaa gacgggcgga tcatgaggtc aagagatcaa gatcatcctg
     3001 gccaacatgg tgaaaccctg tctctactaa aaatacaaaa atgagctggg catggtgggg
     3061 cgtgcctgta gtcccatgta cttgggaggc tgaggcagga aaattcttga acccaggaga
     3121 cggaagttgc agtgagctga gatcacacca ctgcactcca gcctggtgac agagcaagac
     3181 tccggctctt aaaaaaaaaa aaaaaaaaaa a
//