LOCUS BC008735 3014 bp mRNA linear HUM 13-JAN-2004
DEFINITION Homo sapiens F-box and leucine-rich repeat protein 10, mRNA (cDNA
clone IMAGE:3163445), partial cds.
ACCESSION BC008735
VERSION BC008735.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3014)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3014)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008735.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3014
/db_xref="H-InvDB:HIT000087145"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3163445"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3014
/gene="FBXL10"
/gene_synonym="PCCX2"
/db_xref="GeneID:84678"
CDS <1..1885
/gene="FBXL10"
/gene_synonym="PCCX2"
/codon_start=2
/product="FBXL10 protein"
/protein_id="AAH08735.2"
/db_xref="GeneID:84678"
/translation="NDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQKM
NRDNKEGQEPAKRRSECEEAPRRRSDEHSKKVPPDGLLRRKSDDVHLRKKRKYEKPQE
LSGRKRASSLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRKKR
RSWKNAEDRMALANKPLRRFKQEPEDELPEAPPKTRESDHSRSSSPTAGPSTEGAEGP
EEKKKVKMRRKRRLPNKELSRELSKELNHEIQRTENSLANENQQPIKSEPESEGEEPK
RPPGICERPHRFSKGLNGTPRELRHQLGPSLRSPPRVISRPPPSVSPPKCIQMERHVI
RPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRL
WTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGC
SWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVE
LRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINL
SDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQ
KLS"
misc_feature 1076..1195
/gene="FBXL10"
/gene_synonym="PCCX2"
/note="F-box; Region: F-box domain"
/db_xref="CDD:pfam00646"
BASE COUNT 742 a 823 c 779 g 670 t
ORIGIN
1 caacgacgag cttccaaact gctgggagtg tccgaagtgt aaccacgccg gcaagaccgg
61 gaaacaaaag cgtggccctg gctttaagta cgcctccaac ctgcccggct ccctgctcaa
121 ggagcagaag atgaaccggg acaacaagga agggcaggaa cctgccaagc ggaggagtga
181 gtgtgaggag gcgccccggc gcaggtcgga tgagcactcg aagaaggtgc cgccggacgg
241 ccttctgcgc agaaagtctg acgacgtgca cctgaggaag aagcggaaat atgagaagcc
301 ccaggagctg agtggacgca agcgggcctc atcgcttcaa acgtcccccg gttcctcctc
361 tcacctctcg ccgaggcccc ctctaggcag cagcctcagc ccctggtgga gatccagtct
421 cacttacttc cagcagcagc tcaaacctgg caaagaagat aagcttttca ggaaaaagcg
481 gcggtcctgg aagaacgccg aggaccgcat ggcgctggcc aacaagcccc tccggcgctt
541 caagcaggaa cccgaggacg aactgcccga ggcgcccccc aagaccaggg agagcgatca
601 ctcccgctcc agctccccca ccgcgggacc cagcaccgaa ggggccgagg gcccggagga
661 gaagaagaag gtgaagatgc gccggaagcg gcggcttccc aacaaggagc tgagcaggga
721 gctgagcaag gagctcaacc acgagatcca gaggacggag aacagcctgg ccaacgagaa
781 ccagcagccc atcaagtcgg agcctgagag cgagggcgag gagcccaagc ggcccccggg
841 catctgcgag cgtccccacc gcttcagcaa ggggctcaac ggcacccccc gggagctgcg
901 gcaccagctg gggcccagcc tgcgcagccc gccccgtgtc atctcccggc ccccaccctc
961 cgtgtccccg cccaagtgta tccagatgga gcgccatgtg atccggccac cccccatcag
1021 ccccccgcct gactcgctac ccctggacga tggggcagcc cacgtcatgc acagggaggt
1081 gtggatggcc gtcttcagct acctcagcca ccaagacctg tgtgtgtgca tgcgggtctg
1141 caggacctgg aaccgctggt gctgcgataa gcggttgtgg acccgcattg acctgaacca
1201 ctgcaagtct atcacacccc tgatgctgag tggcatcatc cggcgacagc ccgtctccct
1261 cgacctcagc tggaccaata tctccaagaa gcagctgagc tggctcatca accggctgcc
1321 tgggctccgg gacttggtgc tgtcaggctg ctcatggatc gcggtctcgg ccctttgcag
1381 ctccagttgt ccgctgctcc ggaccctgga tgtccagtgg gtggagggac taaaggatgc
1441 ccaaatgcgg gatctcctgt ccccgcccac agacaacagg ccaggtcaga tggacaatcg
1501 gagcaagctc cggaacatcg tggagctgcg cctggcaggc ctggacatca cagatgcctc
1561 cctgcggctc atcatccgcc acatgcccct gctctccaag ctccacctca gttactgtaa
1621 ccacgtcacc gaccagtcta tcaacctgct cactgctgtt ggcaccacca cccgagactc
1681 cttaaccgag atcaacctgt ctgactgcaa taaggtcact gatcagtgcc tgtccttctt
1741 caaacgctgt ggaaacatct gtcatattga cctgaggtac tgcaagcaag tcaccaagga
1801 aggctgtgag cagttcatag ccgagatgtc tgtgagtgtc cagtttgggc aagtagaaga
1861 aaaactcctg caaaaactga gttagtccaa ggataagtat gtaaatacgg ggcgggctct
1921 gggaggggag agactttaca aaaatgaggg cttttatttt ccatttggaa cgtgggacaa
1981 cagaccacaa cgcaattcca ttttgcaagt ctttccaagg gagaagctgt tcaaccaccc
2041 gtttggggga tgagtgagcc gacactttcc tttggtcttt ctgaatcgta actgcactgc
2101 tttctggacc atttctaagg cggcctttac aagaagacat tcctgtcgga gaggagggtg
2161 gacttcggag aaattctcat actgaagcat gagcttagga gtttctgtta gtggtagtgg
2221 tgttttggac acttcattcc ttgcaacacc gaggttttgg gtgttgacat aaagtggacc
2281 acacaccaca tctgctgccg tcttgacact tttttttgtt tggttggttt tgttacatct
2341 tacattatgc agaactattt ttgtacaaat tgtttaaaag ttatttatgc aaggtttgaa
2401 tgcataccag tgtttttatt gttttgagat tgccaatttt cctgatttcc ttaaggtagg
2461 agagaattta acgtgtactt catcgacaca acccatctac aaatgtgccc agatctaaca
2521 aagtaggcta agaccttcca cttaaaagca tgtttaactg gaagttgaga gtctgctttg
2581 tacctcaaga gttacatgag catgttgtgg ataaatgtaa attatagtca aagtaagata
2641 ctctgccaag tttcctctgt agagaattca cttttctcaa attttaaaat ttcgacttca
2701 gcctttgcac tcaggaggtt ctgctccagc atgagctctt gtacttacat agatctaatt
2761 tatacagtga gtcaagacgt agaataaatg ctcccacata gcctttcttt tgcttttgct
2821 tctctcctct gaagtgtgag ttgagttctc atttaggttt gtaacatggc tatttcctag
2881 ttgtaaagtt ctgcatttat aagtgccatt gttgtaaggt ggtgtttcct agaccttccc
2941 tgatgcgatt ttacctttgt tgaatttgta taaacaattg tccaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaa
//