LOCUS BC008652 1441 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lysophospholipase I, mRNA (cDNA clone MGC:9121
IMAGE:3865775), complete cds.
ACCESSION BC008652
VERSION BC008652.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1441)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC008652.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20302148.
FEATURES Location/Qualifiers
source 1..1441
/db_xref="H-InvDB:HIT000033877"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9121 IMAGE:3865775"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1441
/gene="LYPLA1"
/gene_synonym="APT-1"
/gene_synonym="LPL1"
/gene_synonym="LYSOPLA"
/db_xref="GeneID:10434"
/db_xref="HGNC:HGNC:6737"
/db_xref="MIM:605599"
CDS 83..775
/gene="LYPLA1"
/gene_synonym="APT-1"
/gene_synonym="LPL1"
/gene_synonym="LYSOPLA"
/codon_start=1
/product="lysophospholipase I"
/protein_id="AAH08652.1"
/db_xref="GeneID:10434"
/db_xref="HGNC:HGNC:6737"
/db_xref="MIM:605599"
/translation="MCGNNMSTPLPAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGI
RSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQ
EVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGA
NRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDV
KQFIDKLLPPID"
BASE COUNT 409 a 288 c 291 g 453 t
ORIGIN
1 cgggactcgc cgctcgcacg cccttgggcc gcggccgggc gcccgctctt ccttccgctt
61 gcgctgtgag ctgaggcggt gtatgtgcgg caataacatg tcaaccccgc tgcccgccat
121 cgtgcccgcc gcccggaagg ccaccgctgc ggtgattttc ctgcatggat tgggagatac
181 tgggcacgga tgggcagaag cctttgcagg tatcagaagt tcacatatca aatatatctg
241 cccgcatgcg cctgttaggc ctgttacatt aaatatgaac gtggctatgc cttcatggtt
301 tgatattatt gggctttcac cagattcaca ggaggatgaa tctgggatta aacaggcagc
361 agaaaatata aaagctttga ttgatcaaga agtgaagaat ggcattcctt ctaacagaat
421 tattttggga gggttttctc agggaggagc tttatcttta tatactgccc ttaccacaca
481 gcagaaactg gcaggtgtca ctgcactcag ttgctggctt ccacttcggg cttcctttcc
541 acagggtcct atcggtggtg ctaatagaga tatttctatt ctccagtgcc acggggattg
601 tgaccctttg gttcccctga tgtttggttc tcttacggtg gaaaaactaa aaacattggt
661 gaatccagcc aatgtgacct ttaaaaccta tgaaggtatg atgcacagtt cgtgtcaaca
721 ggaaatgatg gatgtcaagc aattcattga taaactccta cctccaattg attgacgtca
781 ctaagaggcc ttgtgtagaa gtacaccagc atcattgtag tagagtgtaa accttttccc
841 atgcccagtc ttcaaatttc taatgttttg cagtgttaaa atgttttgca aatacatgcc
901 aataacacag atcaaataat atctcctcat gagaaattta tgatctttta agtttctata
961 catgtattct tataagacga cccaggatct actatattag aatagatgaa gcaggtagct
1021 tctttttttc tcaaatgtaa ttcagcaaaa taatacagta ctgccaccag attttttatt
1081 acatcatttg aaaattagca gtatgcttaa tgaaaatttg ttcaggtata aatgagcagt
1141 taagatataa acaatttatg catgctgtga cttagtctat ggatttattc caaaattgct
1201 tagtcaccat gcagtgtctg tatttttata tatgtgttca tatatacata atgattataa
1261 tacataataa gaatgaggtg gtattacatt attcctaata atagggataa tgctgtttat
1321 tgtcaagaaa aagtaaaatc gttctcttca attaatggcc cttttatttt gggaccaggc
1381 ttttattttc cctgatatta tttctattta atactctttt ctctcaaaaa aaaaaaaaaa
1441 a
//