LOCUS BC008650 1484 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens hydroxysteroid (17-beta) dehydrogenase 11, mRNA (cDNA
clone MGC:8725 IMAGE:3854750), complete cds.
ACCESSION BC008650
VERSION BC008650.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1484)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1484)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56786142.
FEATURES Location/Qualifiers
source 1..1484
/db_xref="H-InvDB:HIT000033875"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8725 IMAGE:3854750"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1484
/gene="HSD17B11"
/gene_synonym="DHRS8"
/gene_synonym="PAN1B"
/gene_synonym="RETSDR2"
/db_xref="GeneID:51170"
/db_xref="HGNC:HGNC:22960"
CDS 124..1026
/gene="HSD17B11"
/gene_synonym="DHRS8"
/gene_synonym="PAN1B"
/gene_synonym="RETSDR2"
/codon_start=1
/product="HSD17B11 protein"
/protein_id="AAH08650.1"
/db_xref="GeneID:51170"
/db_xref="HGNC:HGNC:22960"
/translation="MKFLLDILLLLPLLIVCSLESFEKLFIPKRRKSVTGEIVLITGA
GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYS
SAKNCKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT
KNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP
NFVNTGFIKKMSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSNCILTTLERILPER
FLAVLKRKISVKFDAVIGYKMKAQ"
BASE COUNT 470 a 275 c 286 g 453 t
ORIGIN
1 acgggagttc ctccttgctc tcgcccctac tctttctggt gttagatcga gcaaccctct
61 aaaagcagtt tagagtggta aaaaaaaaaa aaaacacacc aaacgctcgc agccacaaaa
121 gggatgaaat ttcttctgga catcctcctg cttctcccgt tactgatcgt ctgctcccta
181 gagtccttcg agaagctttt cattcctaag aggagaaaat cagtcaccgg cgaaatcgtg
241 ctgattacag gagctgggca tggaattggg agactgactg cctatgaatt tgctaaactt
301 aaaagcaagc tggttctctg ggatataaat aagcatggac tggaggaaac agctgccaaa
361 tgcaagggac tgggtgccaa ggttcatacc tttgtggtag actgcagcaa ccgagaagat
421 atttacagct ctgcaaagaa ctgcaaggca gaaattggag atgttagtat tttagtaaat
481 aatgctggtg tagtctatac atcagatttg tttgctacac aagatcctca gattgaaaag
541 acttttgaag ttaatgtact tgcacatttc tggactacaa aggcatttct tcctgcaatg
601 acgaagaata accatggcca tattgtcact gtggcttcgg cagctggaca tgtctcggtc
661 cccttcttac tggcttactg ttcaagcaag tttgctgctg ttggatttca taaaactttg
721 acagatgaac tggctgcctt acaaataact ggagtcaaaa caacatgtct gtgtcctaat
781 ttcgtaaaca ctggcttcat caaaaagatg agtacaagtt tgggacccac tctggaacct
841 gaggaagtgg taaacaggct gatgcatggg attctgactg agcagaagat gatttttatt
901 ccatcttcta actgcatttt aacaacattg gaaaggatcc ttcctgagcg tttcctggca
961 gttttaaaac gaaaaatcag tgttaagttt gatgcagtta ttggatataa aatgaaagcg
1021 caataagcac ctagttttct gaaaactgat ttaccaggtt taggttgatg tcatctaata
1081 gtgccagaat tttaatgttt gaacttctgt tttttctaat tatccccatt tcttcaatat
1141 catttttgag gctttggcag tcttcattta ctaccacttg ttctttagcc aaaagctgat
1201 tacatatgat ataaacagag aaataccttt agaggtgact ttaaggaaaa tgaagaaaaa
1261 gaaccaaaat gactttatta aaataatttc caagattatt tgtggctcac ctgaaggctt
1321 tgcaaaattt gtaccataac cgtttattta acatatattt ttatttttga ttgcacttaa
1381 attttgtata atttgtgttt ctttttctgt tctacataaa atcagaaact tcaagctctc
1441 taaataaaat gaaggactat aaaaaaaaaa aaaaaaaaaa aaaa
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