LOCUS BC008630 1552 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens PHD finger protein 23, mRNA (cDNA clone
IMAGE:4155987), partial cds.
ACCESSION BC008630
VERSION BC008630.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1552)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1552)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: d Column: 18.
FEATURES Location/Qualifiers
source 1..1552
/db_xref="H-InvDB:HIT000087114"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4155987"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1552
/gene="PHF23"
/gene_synonym="FLJ16355"
/gene_synonym="FLJ22884"
/gene_synonym="hJUNE-1b"
/gene_synonym="MGC2941"
/db_xref="GeneID:79142"
CDS <1..949
/gene="PHF23"
/gene_synonym="FLJ16355"
/gene_synonym="FLJ22884"
/gene_synonym="hJUNE-1b"
/gene_synonym="MGC2941"
/codon_start=2
/product="PHF23 protein"
/protein_id="AAH08630.1"
/db_xref="GeneID:79142"
/translation="TFVKKAKSSKRRAAQAGPTQPGPPRSTFSRLQAPDSATLLEKMK
LKDSLFDLDGPKVASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKLGP
GAGAGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPQAPPSDTDSE
EEEEEEEEEEEEEMATVVGGEAPVPVLPTPPEAPRPPATVHPEGVPPADSESKEVGST
ETSQDGDASSSEGEMRVMDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIH
LSCAKIKKTNVPDFFYCQKCKELRPEARRLGGPPKSGEP"
BASE COUNT 390 a 406 c 407 g 349 t
ORIGIN
1 gacttttgtt aagaaagcaa agtcatccaa gagaagggca gctcaagcag gtcccaccca
61 gccaggaccc ccaaggtcca ctttctctcg tctgcaggcc cccgacagtg ctaccttgct
121 tgagaagatg aagctcaagg actctctctt tgatctggat gggcccaaag tggcatctcc
181 tttgtccccc acatccctga cacatacctc ccggccccct gctgctctta cccccgtgcc
241 cctttcccag ggggacctct cccatcctcc tcgaaagaag gaccgaaaga accgaaagtt
301 ggggccagga gctggggctg gctttggggt gcttcggagg cctcggccaa ctcctgggga
361 tggggaaaag agatctcgaa tcaagaagag caagaagcgg aagttaaaaa aggcagaacg
421 gggggataga ctcccacctc ctgggcctcc ccaggcaccc cccagtgata cagactctga
481 agaggaggag gaagaggagg aagaggaaga agaagaagag atggcaacag tggtaggggg
541 tgaagcccca gtccctgtgc tgccaacacc ccctgaggct cctaggcccc ctgccacagt
601 gcaccctgaa ggagtccctc ctgctgacag tgaaagcaag gaggtgggca gcactgaaac
661 aagccaagat ggagatgcca gctccagtga aggcgagatg cgggtcatgg acgaggacat
721 catggtagaa tcaggtgatg actcatggga tctgatcaca tgttactgtc gaaagccctt
781 tgcagggcgg cccatgattg agtgcagcct gtgtgggacg tggatccacc tctcctgtgc
841 taagattaag aagaccaacg tccccgactt cttttattgc cagaaatgca aggaactgag
901 gccagaggcc cggcggttag gggggcctcc caaatctgga gagccctgat ggcaccaact
961 ttagcctgga acttccaaat gacaacatga tttgggaact gagcctcagg gtcctcagcc
1021 tatcccctgg agcttggata ctgtctgcac ttcaaggcag gaattctcaa gggagacttg
1081 tttgaaaatg agtgtctcac tttcccaccc tatccttcct ccccactctg tggacttgaa
1141 attgaatcca ttacggttgg ggatgggagg ctgtctgtgt cccgacacat aatctctgtc
1201 tcttggacct gccaccatca ctttctgggt caggattgga attgggatgg aatgggacag
1261 ttgtctataa aactctagtg taaatattag cactcccctc cctcatcttt tcttctattt
1321 cactccccat ttattttctt ctacaccggt tgtattttta attttggact tcccctattg
1381 ggcatggcag ctcaaaggtg gagtactaga gcctggccaa gtgaggaagg aaagcagaaa
1441 ggtgacgatt ctcactcacc tcttttgttt ttaataatat cggccgctgt ttgtacagac
1501 agcctgcgtg ttgtaaataa agcagagtgg gctctttaaa aaaaaaaaaa aa
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