LOCUS BC008616 1328 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens C-type lectin domain family 18, member A, mRNA (cDNA
clone IMAGE:4178394), partial cds.
ACCESSION BC008616
VERSION BC008616.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1328)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1328)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: h Column: 4.
FEATURES Location/Qualifiers
source 1..1328
/db_xref="H-InvDB:HIT000087111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4178394"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1328
/gene="CLEC18A"
/gene_synonym="MRCL"
/gene_synonym="MRCL1"
/db_xref="GeneID:348174"
/db_xref="HGNC:HGNC:30388"
CDS <1..473
/gene="CLEC18A"
/gene_synonym="MRCL"
/gene_synonym="MRCL1"
/codon_start=3
/product="CLEC18A protein"
/protein_id="AAH08616.1"
/db_xref="GeneID:348174"
/db_xref="HGNC:HGNC:30388"
/translation="RVRGCDAPPCCRNPGPWRLPADGKGVLRAWSPERGQLLTPFPGK
GPGREHMGAASAGKRGQKGSWQQTPGSEWANLDYPGPGLTYKTAKDSFRWATGEHQAF
TSFAFGQPATHGFGNCVELQASAAFNWNDQRCKTRNRYICQFAQEHISRWGPGS"
BASE COUNT 305 a 381 c 398 g 244 t
ORIGIN
1 ggcgagtaag gggttgtgat gccccaccct gctgcaggaa ccctgggcca tggcggctgc
61 cagcagatgg caagggtgtg ttgagggcct ggagcccaga gcggggccag ctgctcaccc
121 cctttcccgg gaagggccca ggtagggagc acatgggggc tgccagcgct gggaagaggg
181 gccagaaagg cagctggcag cagactccag ggtctgagtg ggccaacctt gactaccccg
241 gcccagggct cacctacaag accgccaagg actccttccg ctgggccaca ggggagcacc
301 aggccttcac cagttttgcc tttgggcagc ctgccaccca cgggtttggc aactgcgtgg
361 agctgcaggc ttcagctgcc ttcaactgga acgaccagcg ctgcaaaacc cgaaaccgtt
421 acatctgcca gtttgcccag gagcacatct cccggtgggg cccagggtcc tgaggcctga
481 ccacatggct ccctcgcctg ccctgggagc accggctctg cttacctgtc tgcccacctg
541 tctggaacaa gggccaggtt aagatcacat gcctcatgtc caaagaggtc tcagaccttg
601 cacaatgcca gaagttgggc agagagaggc agggaggcca gtgagggcca gggagtgagt
661 gttagaagaa gctggggccc ttcgcctgct tttgattggg aagatgggct tcaatgatga
721 accgaaggag aggacaccgc cagtggtcca aaaaggctgc tctcttccac ctggcccaga
781 ccctgtgggg cagcggagct tccctgtggc atgaacccca cagggtatta aattatgaat
841 cagctgaacc tgtgcatgct catttcaaag ggaaattcag atgatccagg atgaccctgg
901 agagaccaga gggggcctga ggcttcactg cagcggcctc cacccaccta ttccctttcc
961 tggtcacctt catggtccag gacactctct ggaagttctg ggtctcccca agaagaggaa
1021 gaccagactc tgcctcagtg aggagctgtt ctcatggctg gggcccaggc aggcagggta
1081 ttaatagaag ttgctctgaa tgtctgggag acgacgcgtg tgtgttgccc ccaccggcgg
1141 agtgtcatcg caccagggcc aatggtagtc agagcctgtg cagtcccgct ccctcaccca
1201 gctcctcaga catcacccac aaggggttat cactatccca gtttacagca gaagaaatga
1261 aggcagagag attgagtaac ttgcataaga tcatacagct gggagtcaaa cccaaaaaaa
1321 aaaaaaaa
//